Hb_000345_370

Information

Type -
Description -
Location Contig345: 329470-335863
Sequence    

Annotation

kegg
ID rcu:RCOM_1431630
description xaa-pro aminopeptidase, putative (EC:3.4.11.9)
nr
ID XP_012089057.1
description PREDICTED: probable Xaa-Pro aminopeptidase P [Jatropha curcas]
swissprot
ID Q5AVF0
description Probable Xaa-Pro aminopeptidase P OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ampp PE=3 SV=2
trembl
ID A0A067JI08
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23345 PE=4 SV=1
Gene Ontology
ID GO:0009570
description probable xaa-pro aminopeptidase p

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36025: 329795-330800 , PASA_asmbl_36026: 331269-331703 , PASA_asmbl_36027: 331774-332538 , PASA_asmbl_36028: 332695-335832
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000345_370 0.0 - - PREDICTED: probable Xaa-Pro aminopeptidase P [Jatropha curcas]
2 Hb_000144_060 0.0531980875 - - PREDICTED: uncharacterized protein At5g03900, chloroplastic isoform X1 [Jatropha curcas]
3 Hb_002282_070 0.0640764716 - - PREDICTED: protein DJ-1 homolog C isoform X2 [Jatropha curcas]
4 Hb_002542_160 0.0644099341 - - PREDICTED: peptide chain release factor APG3, chloroplastic [Jatropha curcas]
5 Hb_000220_210 0.0647875512 - - PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Jatropha curcas]
6 Hb_000309_020 0.0663271226 - - PREDICTED: uncharacterized protein LOC105641764 [Jatropha curcas]
7 Hb_016461_030 0.0713901337 - - PREDICTED: putative leucine--tRNA ligase, mitochondrial isoform X1 [Jatropha curcas]
8 Hb_025477_050 0.0797488596 - - ABC transporter family protein [Hevea brasiliensis]
9 Hb_011861_050 0.0819135493 - - PREDICTED: COBW domain-containing protein 1 [Jatropha curcas]
10 Hb_003777_020 0.0823556093 - - Fructose-1,6-bisphosphatase, cytosolic, putative [Ricinus communis]
11 Hb_001427_040 0.0836939789 - - PREDICTED: uncharacterized protein LOC105637784 [Jatropha curcas]
12 Hb_007769_040 0.0869879426 - - PREDICTED: probable threonine--tRNA ligase, cytoplasmic [Jatropha curcas]
13 Hb_001472_160 0.0875805134 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
14 Hb_001220_050 0.090049017 - - DNA-damage-inducible protein f, putative [Ricinus communis]
15 Hb_001080_070 0.0939851176 - - 1,4-alpha-glucan branching enzyme [Manihot esculenta]
16 Hb_001723_030 0.0957082998 - - PREDICTED: 30S ribosomal protein S1, chloroplastic [Jatropha curcas]
17 Hb_033312_010 0.0962530215 - - PREDICTED: valine--tRNA ligase, mitochondrial isoform X1 [Jatropha curcas]
18 Hb_000085_070 0.0992898842 - - PREDICTED: trigger factor-like protein TIG, Chloroplastic isoform X1 [Jatropha curcas]
19 Hb_000059_270 0.0995385123 - - superoxide dismutase [Fe], chloroplastic [Jatropha curcas]
20 Hb_002660_190 0.0997357994 - - PREDICTED: dnaJ protein P58IPK homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000345_370 Hb_000345_370 Hb_000144_060 Hb_000144_060 Hb_000345_370--Hb_000144_060 Hb_002282_070 Hb_002282_070 Hb_000345_370--Hb_002282_070 Hb_002542_160 Hb_002542_160 Hb_000345_370--Hb_002542_160 Hb_000220_210 Hb_000220_210 Hb_000345_370--Hb_000220_210 Hb_000309_020 Hb_000309_020 Hb_000345_370--Hb_000309_020 Hb_016461_030 Hb_016461_030 Hb_000345_370--Hb_016461_030 Hb_000144_060--Hb_000309_020 Hb_011861_050 Hb_011861_050 Hb_000144_060--Hb_011861_050 Hb_025477_050 Hb_025477_050 Hb_000144_060--Hb_025477_050 Hb_000144_060--Hb_002542_160 Hb_000144_060--Hb_002282_070 Hb_001427_040 Hb_001427_040 Hb_002282_070--Hb_001427_040 Hb_002282_070--Hb_016461_030 Hb_003777_020 Hb_003777_020 Hb_002282_070--Hb_003777_020 Hb_002685_060 Hb_002685_060 Hb_002282_070--Hb_002685_060 Hb_002542_160--Hb_000220_210 Hb_002542_160--Hb_000309_020 Hb_000085_070 Hb_000085_070 Hb_002542_160--Hb_000085_070 Hb_002542_160--Hb_016461_030 Hb_000032_500 Hb_000032_500 Hb_002542_160--Hb_000032_500 Hb_000220_210--Hb_000309_020 Hb_000220_210--Hb_001427_040 Hb_001472_160 Hb_001472_160 Hb_000220_210--Hb_001472_160 Hb_004884_180 Hb_004884_180 Hb_000220_210--Hb_004884_180 Hb_000480_040 Hb_000480_040 Hb_000309_020--Hb_000480_040 Hb_000309_020--Hb_000085_070 Hb_000816_200 Hb_000816_200 Hb_016461_030--Hb_000816_200 Hb_016461_030--Hb_003777_020 Hb_016461_030--Hb_001427_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.00914 5.58129 14.408 7.29625 6.56803 6.92856
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.04733 6.4414 3.48189 5.83764 30.7173

CAGE analysis