Hb_003777_020

Information

Type -
Description -
Location Contig3777: 7494-12514
Sequence    

Annotation

kegg
ID rcu:RCOM_0454000
description Fructose-1,6-bisphosphatase, cytosolic, putative (EC:1.3.1.74)
nr
ID XP_002532434.1
description Fructose-1,6-bisphosphatase, cytosolic, putative [Ricinus communis]
swissprot
ID P46276
description Fructose-1,6-bisphosphatase, cytosolic OS=Solanum tuberosum PE=2 SV=1
trembl
ID B9T2G5
description Fructose-1,6-bisphosphatase, cytosolic, putative OS=Ricinus communis GN=RCOM_0454000 PE=3 SV=1
Gene Ontology
ID GO:0005634
description fructose- - cytosolic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38419: 7858-8031 , PASA_asmbl_38420: 8032-8290 , PASA_asmbl_38421: 8493-10263 , PASA_asmbl_38423: 11569-11825 , PASA_asmbl_38424: 11826-12459
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003777_020 0.0 - - Fructose-1,6-bisphosphatase, cytosolic, putative [Ricinus communis]
2 Hb_002282_070 0.0657131302 - - PREDICTED: protein DJ-1 homolog C isoform X2 [Jatropha curcas]
3 Hb_002685_060 0.0675093465 - - 30S ribosomal protein S5, putative [Ricinus communis]
4 Hb_016461_030 0.0745819103 - - PREDICTED: putative leucine--tRNA ligase, mitochondrial isoform X1 [Jatropha curcas]
5 Hb_000661_090 0.0789102405 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
6 Hb_000345_370 0.0823556093 - - PREDICTED: probable Xaa-Pro aminopeptidase P [Jatropha curcas]
7 Hb_001427_040 0.0894520826 - - PREDICTED: uncharacterized protein LOC105637784 [Jatropha curcas]
8 Hb_005276_010 0.0922023502 - - hypothetical protein CICLE_v10021605mg [Citrus clementina]
9 Hb_001723_030 0.0983462111 - - PREDICTED: 30S ribosomal protein S1, chloroplastic [Jatropha curcas]
10 Hb_002660_190 0.1035109044 - - PREDICTED: dnaJ protein P58IPK homolog [Jatropha curcas]
11 Hb_093458_060 0.1056082301 - - PREDICTED: uncharacterized protein LOC105633194 [Jatropha curcas]
12 Hb_000144_060 0.1066088215 - - PREDICTED: uncharacterized protein At5g03900, chloroplastic isoform X1 [Jatropha curcas]
13 Hb_006637_080 0.107604947 - - PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Jatropha curcas]
14 Hb_000309_020 0.1079111636 - - PREDICTED: uncharacterized protein LOC105641764 [Jatropha curcas]
15 Hb_000164_140 0.1092759065 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
16 Hb_002027_410 0.109329768 - - PREDICTED: protease Do-like 2, chloroplastic [Jatropha curcas]
17 Hb_002542_160 0.111918039 - - PREDICTED: peptide chain release factor APG3, chloroplastic [Jatropha curcas]
18 Hb_000059_270 0.1140476493 - - superoxide dismutase [Fe], chloroplastic [Jatropha curcas]
19 Hb_002671_130 0.1152402054 - - GTP-binding protein typa/bipa, putative [Ricinus communis]
20 Hb_036790_120 0.1159754677 - - PREDICTED: uncharacterized protein LOC105645122 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003777_020 Hb_003777_020 Hb_002282_070 Hb_002282_070 Hb_003777_020--Hb_002282_070 Hb_002685_060 Hb_002685_060 Hb_003777_020--Hb_002685_060 Hb_016461_030 Hb_016461_030 Hb_003777_020--Hb_016461_030 Hb_000661_090 Hb_000661_090 Hb_003777_020--Hb_000661_090 Hb_000345_370 Hb_000345_370 Hb_003777_020--Hb_000345_370 Hb_001427_040 Hb_001427_040 Hb_003777_020--Hb_001427_040 Hb_002282_070--Hb_001427_040 Hb_002282_070--Hb_016461_030 Hb_002282_070--Hb_000345_370 Hb_002282_070--Hb_002685_060 Hb_000144_060 Hb_000144_060 Hb_002282_070--Hb_000144_060 Hb_002685_060--Hb_016461_030 Hb_007054_070 Hb_007054_070 Hb_002685_060--Hb_007054_070 Hb_002685_060--Hb_000661_090 Hb_005276_010 Hb_005276_010 Hb_002685_060--Hb_005276_010 Hb_000816_200 Hb_000816_200 Hb_016461_030--Hb_000816_200 Hb_016461_030--Hb_000345_370 Hb_002542_160 Hb_002542_160 Hb_016461_030--Hb_002542_160 Hb_016461_030--Hb_001427_040 Hb_002671_130 Hb_002671_130 Hb_000661_090--Hb_002671_130 Hb_000661_090--Hb_016461_030 Hb_000684_280 Hb_000684_280 Hb_000661_090--Hb_000684_280 Hb_000661_090--Hb_002282_070 Hb_000537_070 Hb_000537_070 Hb_000661_090--Hb_000537_070 Hb_000345_370--Hb_000144_060 Hb_000345_370--Hb_002542_160 Hb_000220_210 Hb_000220_210 Hb_000345_370--Hb_000220_210 Hb_000309_020 Hb_000309_020 Hb_000345_370--Hb_000309_020 Hb_001427_040--Hb_000220_210 Hb_001427_040--Hb_002542_160 Hb_001427_040--Hb_000345_370 Hb_002660_190 Hb_002660_190 Hb_001427_040--Hb_002660_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.8592 23.9662 66.578 30.1383 29.9057 32.1722
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
42.5088 30.3411 25.6 21.2971 181.034

CAGE analysis