Hb_134429_010

Information

Type -
Description -
Location Contig134429: 25-2218
Sequence    

Annotation

kegg
ID rcu:RCOM_0618840
description hypothetical protein
nr
ID XP_002528846.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q69ZF3
description Non-lysosomal glucosylceramidase OS=Mus musculus GN=Gba2 PE=1 SV=2
trembl
ID B9SS77
description Non-lysosomal glucosylceramidase OS=Ricinus communis GN=RCOM_0618840 PE=3 SV=1
Gene Ontology
ID GO:0016021
description non-lysosomal glucosylceramidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_134429_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_050912_010 0.0997572621 - - PREDICTED: amidase 1-like isoform X2 [Jatropha curcas]
3 Hb_002871_140 0.1098578757 - - hypothetical protein JCGZ_06847 [Jatropha curcas]
4 Hb_000071_150 0.1159758132 - - Stearoy-ACP desaturase [Ricinus communis]
5 Hb_051257_010 0.1228083269 - - -
6 Hb_000664_020 0.1259650267 - - tryptophanyl-tRNA synthetase, putative [Ricinus communis]
7 Hb_005064_010 0.1285703427 - - PREDICTED: kelch repeat-containing protein At3g27220-like [Jatropha curcas]
8 Hb_006541_040 0.1287340706 - - PREDICTED: diphthamide biosynthesis protein 2 [Jatropha curcas]
9 Hb_005170_010 0.1320983711 - - -
10 Hb_007786_030 0.1366575436 - - PREDICTED: ribonucleoside-diphosphate reductase large subunit [Jatropha curcas]
11 Hb_004064_040 0.1394492727 - - PREDICTED: Down syndrome critical region protein 3 homolog isoform X3 [Jatropha curcas]
12 Hb_164010_050 0.1405309202 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH1 [Jatropha curcas]
13 Hb_006810_030 0.1415272268 - - Uncharacterized protein isoform 1 [Theobroma cacao]
14 Hb_000154_050 0.141631116 - - CMP-sialic acid transporter, putative [Ricinus communis]
15 Hb_005015_060 0.1419243486 - - PREDICTED: developmentally-regulated G-protein 3 [Jatropha curcas]
16 Hb_000056_130 0.1456564126 - - Sucrose Transporter 2C [Hevea brasiliensis subsp. brasiliensis]
17 Hb_000103_120 0.147264255 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X2 [Jatropha curcas]
18 Hb_000160_070 0.147619555 - - PREDICTED: uncharacterized protein LOC105648219 [Jatropha curcas]
19 Hb_000320_290 0.1482402284 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
20 Hb_000094_290 0.1488546726 - - PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_134429_010 Hb_134429_010 Hb_050912_010 Hb_050912_010 Hb_134429_010--Hb_050912_010 Hb_002871_140 Hb_002871_140 Hb_134429_010--Hb_002871_140 Hb_000071_150 Hb_000071_150 Hb_134429_010--Hb_000071_150 Hb_051257_010 Hb_051257_010 Hb_134429_010--Hb_051257_010 Hb_000664_020 Hb_000664_020 Hb_134429_010--Hb_000664_020 Hb_005064_010 Hb_005064_010 Hb_134429_010--Hb_005064_010 Hb_006541_040 Hb_006541_040 Hb_050912_010--Hb_006541_040 Hb_002400_330 Hb_002400_330 Hb_050912_010--Hb_002400_330 Hb_005015_060 Hb_005015_060 Hb_050912_010--Hb_005015_060 Hb_161994_030 Hb_161994_030 Hb_050912_010--Hb_161994_030 Hb_000056_130 Hb_000056_130 Hb_050912_010--Hb_000056_130 Hb_000903_010 Hb_000903_010 Hb_002871_140--Hb_000903_010 Hb_000154_050 Hb_000154_050 Hb_002871_140--Hb_000154_050 Hb_002749_080 Hb_002749_080 Hb_002871_140--Hb_002749_080 Hb_002871_140--Hb_005064_010 Hb_002837_040 Hb_002837_040 Hb_002871_140--Hb_002837_040 Hb_033642_040 Hb_033642_040 Hb_002871_140--Hb_033642_040 Hb_171334_010 Hb_171334_010 Hb_000071_150--Hb_171334_010 Hb_005895_010 Hb_005895_010 Hb_000071_150--Hb_005895_010 Hb_000071_150--Hb_002871_140 Hb_000072_090 Hb_000072_090 Hb_000071_150--Hb_000072_090 Hb_012098_150 Hb_012098_150 Hb_000071_150--Hb_012098_150 Hb_000071_150--Hb_000056_130 Hb_164010_050 Hb_164010_050 Hb_051257_010--Hb_164010_050 Hb_000889_100 Hb_000889_100 Hb_051257_010--Hb_000889_100 Hb_000684_260 Hb_000684_260 Hb_051257_010--Hb_000684_260 Hb_000094_290 Hb_000094_290 Hb_051257_010--Hb_000094_290 Hb_010003_010 Hb_010003_010 Hb_051257_010--Hb_010003_010 Hb_084994_010 Hb_084994_010 Hb_000664_020--Hb_084994_010 Hb_015099_030 Hb_015099_030 Hb_000664_020--Hb_015099_030 Hb_000664_020--Hb_002871_140 Hb_132082_010 Hb_132082_010 Hb_000664_020--Hb_132082_010 Hb_001085_070 Hb_001085_070 Hb_000664_020--Hb_001085_070 Hb_024184_010 Hb_024184_010 Hb_000664_020--Hb_024184_010 Hb_004064_040 Hb_004064_040 Hb_005064_010--Hb_004064_040 Hb_005064_010--Hb_000154_050 Hb_001002_060 Hb_001002_060 Hb_005064_010--Hb_001002_060 Hb_001227_120 Hb_001227_120 Hb_005064_010--Hb_001227_120 Hb_003540_050 Hb_003540_050 Hb_005064_010--Hb_003540_050 Hb_000160_070 Hb_000160_070 Hb_005064_010--Hb_000160_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.513592 0.732542 2.24467 2.40204 0.774599 2.25196
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.808495 0.423813 0.38336 1.09354 1.489

CAGE analysis