Hb_101517_010

Information

Type -
Description -
Location Contig101517: 3157-3883
Sequence    

Annotation

kegg
ID pop:POPTR_0007s07670g
description POPTRDRAFT_1082860; hypothetical protein
nr
ID XP_012066575.1
description PREDICTED: uncharacterized protein LOC105629574 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDM4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24369 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101517_010 0.0 - - PREDICTED: uncharacterized protein LOC105629574 [Jatropha curcas]
2 Hb_000395_250 0.1480802189 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12 [Jatropha curcas]
3 Hb_000031_210 0.1489513844 - - cytochrome P450, putative [Ricinus communis]
4 Hb_001006_110 0.1491721673 - - PREDICTED: uncharacterized protein LOC105634212 [Jatropha curcas]
5 Hb_022693_020 0.1564059642 - - pectin acetylesterase, putative [Ricinus communis]
6 Hb_009393_140 0.1593461177 - - PREDICTED: uncharacterized protein LOC105638053 isoform X1 [Jatropha curcas]
7 Hb_004052_030 0.1642215041 - - PREDICTED: uncharacterized protein LOC105640637 [Jatropha curcas]
8 Hb_000679_320 0.1677703541 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105136146 [Populus euphratica]
9 Hb_044478_010 0.1736602733 - - plastoquinol-plastocyanin reductase, putative [Ricinus communis]
10 Hb_163950_040 0.1766905393 - - PREDICTED: putative 4-hydroxy-tetrahydrodipicolinate reductase 3, chloroplastic [Jatropha curcas]
11 Hb_001946_120 0.1769862155 - - PREDICTED: SPX domain-containing protein 1-like [Jatropha curcas]
12 Hb_000392_470 0.1777154492 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001999_070 0.177771226 - - PREDICTED: ammonium transporter 1 member 3 [Jatropha curcas]
14 Hb_000110_280 0.1786061379 - - PREDICTED: uncharacterized protein LOC105642012, partial [Jatropha curcas]
15 Hb_000252_180 0.1793165058 - - Glutamate--glyoxylate aminotransferase 2 [Morus notabilis]
16 Hb_169383_010 0.1804197913 - - PREDICTED: phosphoglycolate phosphatase 1B, chloroplastic [Jatropha curcas]
17 Hb_005111_040 0.182443159 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
18 Hb_000984_160 0.1826888933 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
19 Hb_000608_190 0.1827994982 rubber biosynthesis Gene Name: Isopentenyl-diphosphate delta isomerase PREDICTED: isopentenyl-diphosphate Delta-isomerase I [Jatropha curcas]
20 Hb_189208_040 0.1829008049 - - hypothetical protein POPTR_0002s18920g [Populus trichocarpa]

Gene co-expression network

sample Hb_101517_010 Hb_101517_010 Hb_000395_250 Hb_000395_250 Hb_101517_010--Hb_000395_250 Hb_000031_210 Hb_000031_210 Hb_101517_010--Hb_000031_210 Hb_001006_110 Hb_001006_110 Hb_101517_010--Hb_001006_110 Hb_022693_020 Hb_022693_020 Hb_101517_010--Hb_022693_020 Hb_009393_140 Hb_009393_140 Hb_101517_010--Hb_009393_140 Hb_004052_030 Hb_004052_030 Hb_101517_010--Hb_004052_030 Hb_000392_470 Hb_000392_470 Hb_000395_250--Hb_000392_470 Hb_004128_170 Hb_004128_170 Hb_000395_250--Hb_004128_170 Hb_002042_210 Hb_002042_210 Hb_000395_250--Hb_002042_210 Hb_006291_050 Hb_006291_050 Hb_000395_250--Hb_006291_050 Hb_000099_120 Hb_000099_120 Hb_000395_250--Hb_000099_120 Hb_044478_010 Hb_044478_010 Hb_000395_250--Hb_044478_010 Hb_000083_220 Hb_000083_220 Hb_000031_210--Hb_000083_220 Hb_010978_020 Hb_010978_020 Hb_000031_210--Hb_010978_020 Hb_000031_210--Hb_001006_110 Hb_001296_060 Hb_001296_060 Hb_000031_210--Hb_001296_060 Hb_001999_070 Hb_001999_070 Hb_000031_210--Hb_001999_070 Hb_002986_030 Hb_002986_030 Hb_000031_210--Hb_002986_030 Hb_001500_130 Hb_001500_130 Hb_001006_110--Hb_001500_130 Hb_001006_110--Hb_000083_220 Hb_002387_010 Hb_002387_010 Hb_001006_110--Hb_002387_010 Hb_000076_240 Hb_000076_240 Hb_001006_110--Hb_000076_240 Hb_000318_310 Hb_000318_310 Hb_001006_110--Hb_000318_310 Hb_000679_320 Hb_000679_320 Hb_022693_020--Hb_000679_320 Hb_003018_150 Hb_003018_150 Hb_022693_020--Hb_003018_150 Hb_022693_020--Hb_009393_140 Hb_000359_160 Hb_000359_160 Hb_022693_020--Hb_000359_160 Hb_001541_280 Hb_001541_280 Hb_022693_020--Hb_001541_280 Hb_020141_030 Hb_020141_030 Hb_022693_020--Hb_020141_030 Hb_009393_140--Hb_000679_320 Hb_000252_180 Hb_000252_180 Hb_009393_140--Hb_000252_180 Hb_006472_040 Hb_006472_040 Hb_009393_140--Hb_006472_040 Hb_009393_140--Hb_000359_160 Hb_004979_050 Hb_004979_050 Hb_009393_140--Hb_004979_050 Hb_000984_160 Hb_000984_160 Hb_004052_030--Hb_000984_160 Hb_004052_030--Hb_044478_010 Hb_003358_030 Hb_003358_030 Hb_004052_030--Hb_003358_030 Hb_005111_040 Hb_005111_040 Hb_004052_030--Hb_005111_040 Hb_005569_010 Hb_005569_010 Hb_004052_030--Hb_005569_010 Hb_000482_180 Hb_000482_180 Hb_004052_030--Hb_000482_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0571359 0.35367 0.437329 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.129122 0 0 0.0841631 1.14378

CAGE analysis