Hb_005569_010

Information

Type -
Description -
Location Contig5569: 17891-19126
Sequence    

Annotation

kegg
ID rcu:RCOM_0747040
description Heme-binding protein, putative
nr
ID XP_002530132.1
description Heme-binding protein, putative [Ricinus communis]
swissprot
ID Q9Y5Z4
description Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1
trembl
ID B9SVW3
description Heme-binding protein, putative OS=Ricinus communis GN=RCOM_0747040 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48586: 18050-19161
cDNA
(Sanger)
(ID:Location)		 037_D03.ab1: 18263-19161

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005569_010 0.0 - - Heme-binding protein, putative [Ricinus communis]
2 Hb_004835_020 0.0469109468 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
3 Hb_000984_160 0.0533349119 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
4 Hb_000424_140 0.0558732895 - - Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]
5 Hb_003195_080 0.0716037348 - - PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
6 Hb_000329_440 0.0789899554 - - PREDICTED: F-box protein At5g51370-like [Jatropha curcas]
7 Hb_000958_090 0.0791318111 - - PREDICTED: cation/H(+) antiporter 28 [Jatropha curcas]
8 Hb_000076_060 0.0825442943 - - hypothetical protein RCOM_0586940 [Ricinus communis]
9 Hb_102179_010 0.0831624635 - - protein binding protein, putative [Ricinus communis]
10 Hb_005694_120 0.0847673772 - - PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type [Jatropha curcas]
11 Hb_000520_040 0.0850712885 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
12 Hb_000847_030 0.0865867326 - - PREDICTED: asparagine--tRNA ligase, cytoplasmic 2 [Jatropha curcas]
13 Hb_131876_010 0.0879084509 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like isoform X1 [Jatropha curcas]
14 Hb_005111_040 0.0879353345 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
15 Hb_001098_040 0.0892429954 - - hypothetical protein JCGZ_00749 [Jatropha curcas]
16 Hb_001946_120 0.0893951896 - - PREDICTED: SPX domain-containing protein 1-like [Jatropha curcas]
17 Hb_004052_030 0.0899644144 - - PREDICTED: uncharacterized protein LOC105640637 [Jatropha curcas]
18 Hb_011214_130 0.0918652746 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 [Jatropha curcas]
19 Hb_001047_210 0.0925100148 - - PSI reaction center subunit II [Citrus sinensis]
20 Hb_000608_190 0.0967056926 rubber biosynthesis Gene Name: Isopentenyl-diphosphate delta isomerase PREDICTED: isopentenyl-diphosphate Delta-isomerase I [Jatropha curcas]

Gene co-expression network

sample Hb_005569_010 Hb_005569_010 Hb_004835_020 Hb_004835_020 Hb_005569_010--Hb_004835_020 Hb_000984_160 Hb_000984_160 Hb_005569_010--Hb_000984_160 Hb_000424_140 Hb_000424_140 Hb_005569_010--Hb_000424_140 Hb_003195_080 Hb_003195_080 Hb_005569_010--Hb_003195_080 Hb_000329_440 Hb_000329_440 Hb_005569_010--Hb_000329_440 Hb_000958_090 Hb_000958_090 Hb_005569_010--Hb_000958_090 Hb_102179_010 Hb_102179_010 Hb_004835_020--Hb_102179_010 Hb_004835_020--Hb_000329_440 Hb_004835_020--Hb_000958_090 Hb_000520_040 Hb_000520_040 Hb_004835_020--Hb_000520_040 Hb_001047_210 Hb_001047_210 Hb_004835_020--Hb_001047_210 Hb_131876_010 Hb_131876_010 Hb_000984_160--Hb_131876_010 Hb_004052_030 Hb_004052_030 Hb_000984_160--Hb_004052_030 Hb_069696_020 Hb_069696_020 Hb_000984_160--Hb_069696_020 Hb_001946_120 Hb_001946_120 Hb_000984_160--Hb_001946_120 Hb_000847_030 Hb_000847_030 Hb_000984_160--Hb_000847_030 Hb_000670_070 Hb_000670_070 Hb_000424_140--Hb_000670_070 Hb_005842_010 Hb_005842_010 Hb_000424_140--Hb_005842_010 Hb_000424_140--Hb_000958_090 Hb_000608_190 Hb_000608_190 Hb_000424_140--Hb_000608_190 Hb_009421_070 Hb_009421_070 Hb_000424_140--Hb_009421_070 Hb_003195_080--Hb_004835_020 Hb_003195_080--Hb_000984_160 Hb_003195_080--Hb_000424_140 Hb_016924_010 Hb_016924_010 Hb_003195_080--Hb_016924_010 Hb_003195_080--Hb_004052_030 Hb_000329_440--Hb_000520_040 Hb_001098_040 Hb_001098_040 Hb_000329_440--Hb_001098_040 Hb_000500_240 Hb_000500_240 Hb_000329_440--Hb_000500_240 Hb_000329_440--Hb_102179_010 Hb_005694_160 Hb_005694_160 Hb_000329_440--Hb_005694_160 Hb_026549_060 Hb_026549_060 Hb_000958_090--Hb_026549_060 Hb_000958_090--Hb_001047_210 Hb_173387_010 Hb_173387_010 Hb_000958_090--Hb_173387_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.129515 25.7595 110.561 124.198 0 0.130646
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.381093 0.099922 0.0618449 17.504 240.08

CAGE analysis