Hb_003195_080

Information

Type -
Description -
Location Contig3195: 117920-120738
Sequence    

Annotation

kegg
ID pmum:103334757
description cytochrome P450 87A3-like
nr
ID XP_012081783.1
description PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
swissprot
ID Q7XU38
description Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3
trembl
ID A0A067K0B6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18828 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 87a3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33667: 117824-119031
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003195_080 0.0 - - PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
2 Hb_005569_010 0.0716037348 - - Heme-binding protein, putative [Ricinus communis]
3 Hb_004835_020 0.0841851573 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
4 Hb_000984_160 0.0848899035 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
5 Hb_000424_140 0.0883977227 - - Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]
6 Hb_016924_010 0.095104714 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004052_030 0.0975060002 - - PREDICTED: uncharacterized protein LOC105640637 [Jatropha curcas]
8 Hb_000608_190 0.0975737196 rubber biosynthesis Gene Name: Isopentenyl-diphosphate delta isomerase PREDICTED: isopentenyl-diphosphate Delta-isomerase I [Jatropha curcas]
9 Hb_000847_030 0.0982129649 - - PREDICTED: asparagine--tRNA ligase, cytoplasmic 2 [Jatropha curcas]
10 Hb_002713_060 0.100334717 - - PREDICTED: protein NRT1/ PTR FAMILY 6.4 [Jatropha curcas]
11 Hb_000958_090 0.1016631113 - - PREDICTED: cation/H(+) antiporter 28 [Jatropha curcas]
12 Hb_000705_040 0.1037677565 - - conserved hypothetical protein [Ricinus communis]
13 Hb_029223_010 0.105316529 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
14 Hb_004979_070 0.1067061693 - - wall-associated receptor kinase galacturonan-binding protein [Medicago truncatula]
15 Hb_000270_640 0.108856589 - - hypothetical protein POPTR_0012s07880g [Populus trichocarpa]
16 Hb_000076_060 0.111838607 - - hypothetical protein RCOM_0586940 [Ricinus communis]
17 Hb_002943_020 0.1129646439 - - hypothetical protein POPTR_0075s00240g, partial [Populus trichocarpa]
18 Hb_005111_040 0.1130645858 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
19 Hb_069696_020 0.1134843278 - - PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Jatropha curcas]
20 Hb_102179_010 0.113761182 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_003195_080 Hb_003195_080 Hb_005569_010 Hb_005569_010 Hb_003195_080--Hb_005569_010 Hb_004835_020 Hb_004835_020 Hb_003195_080--Hb_004835_020 Hb_000984_160 Hb_000984_160 Hb_003195_080--Hb_000984_160 Hb_000424_140 Hb_000424_140 Hb_003195_080--Hb_000424_140 Hb_016924_010 Hb_016924_010 Hb_003195_080--Hb_016924_010 Hb_004052_030 Hb_004052_030 Hb_003195_080--Hb_004052_030 Hb_005569_010--Hb_004835_020 Hb_005569_010--Hb_000984_160 Hb_005569_010--Hb_000424_140 Hb_000329_440 Hb_000329_440 Hb_005569_010--Hb_000329_440 Hb_000958_090 Hb_000958_090 Hb_005569_010--Hb_000958_090 Hb_102179_010 Hb_102179_010 Hb_004835_020--Hb_102179_010 Hb_004835_020--Hb_000329_440 Hb_004835_020--Hb_000958_090 Hb_000520_040 Hb_000520_040 Hb_004835_020--Hb_000520_040 Hb_001047_210 Hb_001047_210 Hb_004835_020--Hb_001047_210 Hb_131876_010 Hb_131876_010 Hb_000984_160--Hb_131876_010 Hb_000984_160--Hb_004052_030 Hb_069696_020 Hb_069696_020 Hb_000984_160--Hb_069696_020 Hb_001946_120 Hb_001946_120 Hb_000984_160--Hb_001946_120 Hb_000847_030 Hb_000847_030 Hb_000984_160--Hb_000847_030 Hb_000670_070 Hb_000670_070 Hb_000424_140--Hb_000670_070 Hb_005842_010 Hb_005842_010 Hb_000424_140--Hb_005842_010 Hb_000424_140--Hb_000958_090 Hb_000608_190 Hb_000608_190 Hb_000424_140--Hb_000608_190 Hb_009421_070 Hb_009421_070 Hb_000424_140--Hb_009421_070 Hb_029223_010 Hb_029223_010 Hb_016924_010--Hb_029223_010 Hb_000270_640 Hb_000270_640 Hb_016924_010--Hb_000270_640 Hb_003145_010 Hb_003145_010 Hb_016924_010--Hb_003145_010 Hb_030827_010 Hb_030827_010 Hb_016924_010--Hb_030827_010 Hb_016924_010--Hb_069696_020 Hb_044478_010 Hb_044478_010 Hb_004052_030--Hb_044478_010 Hb_003358_030 Hb_003358_030 Hb_004052_030--Hb_003358_030 Hb_005111_040 Hb_005111_040 Hb_004052_030--Hb_005111_040 Hb_004052_030--Hb_005569_010 Hb_000482_180 Hb_000482_180 Hb_004052_030--Hb_000482_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0521231 0.508464 1.57641 1.9456 0 0.0107665
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.377187 4.20484

CAGE analysis