Hb_003145_010

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig3145: 10257-14938
Sequence    

Annotation

kegg
ID rcu:RCOM_0454760
description hypothetical protein
nr
ID XP_012065255.1
description PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
swissprot
ID Q9LQ54
description Probable disease resistance protein At1g59620 OS=Arabidopsis thaliana GN=At1g59620 PE=2 SV=3
trembl
ID A0A067LH24
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20885 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003145_010 0.0 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
2 Hb_030827_010 0.0704188471 transcription factor TF Family: HB Homeobox-leucine zipper ROC6 [Gossypium arboreum]
3 Hb_011242_010 0.0966254428 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 [Jatropha curcas]
4 Hb_001417_060 0.0969639854 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
5 Hb_000627_050 0.1005796202 - - PREDICTED: uncharacterized protein LOC105632845 [Jatropha curcas]
6 Hb_029223_010 0.1035338526 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
7 Hb_016924_010 0.1036857038 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002636_070 0.1053258965 - - PREDICTED: putative U-box domain-containing protein 42 [Jatropha curcas]
9 Hb_069696_020 0.1057439669 - - PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Jatropha curcas]
10 Hb_002724_010 0.1095963152 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Citrus sinensis]
11 Hb_001046_030 0.109864567 - - UDP-glucosyltransferase, putative [Ricinus communis]
12 Hb_002890_200 0.110023691 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]
13 Hb_000318_010 0.1119597266 - - calcium-dependent protein kinase 6 [Hevea brasiliensis]
14 Hb_000703_120 0.1129862103 - - PREDICTED: uncharacterized protein LOC105635706 isoform X1 [Jatropha curcas]
15 Hb_003058_170 0.1139335125 - - PREDICTED: F-box protein At2g26850 isoform X1 [Jatropha curcas]
16 Hb_097335_010 0.1173114658 - - abhydrolase domain containing, putative [Ricinus communis]
17 Hb_001278_090 0.1178897884 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
18 Hb_000968_010 0.1182077639 - - PREDICTED: glutamate receptor 3.7 isoform X1 [Jatropha curcas]
19 Hb_000705_040 0.1205180836 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000680_130 0.1211502743 - - beta-galactosidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_003145_010 Hb_003145_010 Hb_030827_010 Hb_030827_010 Hb_003145_010--Hb_030827_010 Hb_011242_010 Hb_011242_010 Hb_003145_010--Hb_011242_010 Hb_001417_060 Hb_001417_060 Hb_003145_010--Hb_001417_060 Hb_000627_050 Hb_000627_050 Hb_003145_010--Hb_000627_050 Hb_029223_010 Hb_029223_010 Hb_003145_010--Hb_029223_010 Hb_016924_010 Hb_016924_010 Hb_003145_010--Hb_016924_010 Hb_069696_020 Hb_069696_020 Hb_030827_010--Hb_069696_020 Hb_030827_010--Hb_000627_050 Hb_030827_010--Hb_016924_010 Hb_000703_120 Hb_000703_120 Hb_030827_010--Hb_000703_120 Hb_001278_090 Hb_001278_090 Hb_030827_010--Hb_001278_090 Hb_114917_010 Hb_114917_010 Hb_011242_010--Hb_114917_010 Hb_005183_040 Hb_005183_040 Hb_011242_010--Hb_005183_040 Hb_097335_010 Hb_097335_010 Hb_011242_010--Hb_097335_010 Hb_000979_260 Hb_000979_260 Hb_011242_010--Hb_000979_260 Hb_011242_010--Hb_030827_010 Hb_001046_030 Hb_001046_030 Hb_001417_060--Hb_001046_030 Hb_017358_020 Hb_017358_020 Hb_001417_060--Hb_017358_020 Hb_000868_130 Hb_000868_130 Hb_001417_060--Hb_000868_130 Hb_001789_120 Hb_001789_120 Hb_001417_060--Hb_001789_120 Hb_001417_060--Hb_000627_050 Hb_000941_090 Hb_000941_090 Hb_001417_060--Hb_000941_090 Hb_000212_410 Hb_000212_410 Hb_000627_050--Hb_000212_410 Hb_000627_050--Hb_000703_120 Hb_009788_020 Hb_009788_020 Hb_000627_050--Hb_009788_020 Hb_007270_020 Hb_007270_020 Hb_000627_050--Hb_007270_020 Hb_000627_050--Hb_069696_020 Hb_000977_020 Hb_000977_020 Hb_000627_050--Hb_000977_020 Hb_029223_010--Hb_016924_010 Hb_002636_070 Hb_002636_070 Hb_029223_010--Hb_002636_070 Hb_000705_040 Hb_000705_040 Hb_029223_010--Hb_000705_040 Hb_003142_080 Hb_003142_080 Hb_029223_010--Hb_003142_080 Hb_000270_640 Hb_000270_640 Hb_029223_010--Hb_000270_640 Hb_000836_030 Hb_000836_030 Hb_029223_010--Hb_000836_030 Hb_003195_080 Hb_003195_080 Hb_016924_010--Hb_003195_080 Hb_016924_010--Hb_000270_640 Hb_016924_010--Hb_069696_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0238664 1.48801 3.65419 3.76492 0.0266035 0.103199
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0311563 0.0612933 0.140535 1.3814 6.32147

CAGE analysis