Hb_000359_160

Information

Type -
Description -
Location Contig359: 173794-182662
Sequence    

Annotation

kegg
ID rcu:RCOM_0323920
description expressed protein, putative
nr
ID XP_012086473.1
description PREDICTED: protein CAJ1 [Jatropha curcas]
swissprot
ID Q3AF07
description Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) GN=dnaJ PE=3 SV=1
trembl
ID A0A067K1U7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23709 PE=4 SV=1
Gene Ontology
ID GO:0005506
description protein caj1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37054: 174047-182386
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000359_160 0.0 - - PREDICTED: protein CAJ1 [Jatropha curcas]
2 Hb_004979_050 0.0883800286 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
3 Hb_000679_320 0.0921064417 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105136146 [Populus euphratica]
4 Hb_009393_140 0.1072004866 - - PREDICTED: uncharacterized protein LOC105638053 isoform X1 [Jatropha curcas]
5 Hb_000723_320 0.1077591076 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
6 Hb_000359_070 0.1119455147 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic [Jatropha curcas]
7 Hb_002814_010 0.1125061437 - - PREDICTED: adenylate kinase 5, chloroplastic [Jatropha curcas]
8 Hb_001266_160 0.1125700161 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
9 Hb_000966_040 0.113783856 - - hypothetical protein JCGZ_01642 [Jatropha curcas]
10 Hb_000208_270 0.1141119888 - - PREDICTED: malate dehydrogenase [NADP], chloroplastic [Jatropha curcas]
11 Hb_011900_020 0.1176872799 - - PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Jatropha curcas]
12 Hb_156850_020 0.1216568388 - - ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
13 Hb_022693_020 0.1227776273 - - pectin acetylesterase, putative [Ricinus communis]
14 Hb_001775_100 0.1286939931 - - PREDICTED: probable 2-carboxy-D-arabinitol-1-phosphatase [Jatropha curcas]
15 Hb_001517_010 0.1337957602 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000029_330 0.1345476167 - - PREDICTED: protein TIC 62, chloroplastic [Jatropha curcas]
17 Hb_000069_370 0.1356070055 - - -
18 Hb_003905_030 0.1366216073 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
19 Hb_004712_200 0.1374484436 - - hypothetical protein CICLE_v10010292mg [Citrus clementina]
20 Hb_004109_130 0.1383680037 - - PREDICTED: translation initiation factor IF-2, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000359_160 Hb_000359_160 Hb_004979_050 Hb_004979_050 Hb_000359_160--Hb_004979_050 Hb_000679_320 Hb_000679_320 Hb_000359_160--Hb_000679_320 Hb_009393_140 Hb_009393_140 Hb_000359_160--Hb_009393_140 Hb_000723_320 Hb_000723_320 Hb_000359_160--Hb_000723_320 Hb_000359_070 Hb_000359_070 Hb_000359_160--Hb_000359_070 Hb_002814_010 Hb_002814_010 Hb_000359_160--Hb_002814_010 Hb_004979_050--Hb_000679_320 Hb_008112_020 Hb_008112_020 Hb_004979_050--Hb_008112_020 Hb_001266_160 Hb_001266_160 Hb_004979_050--Hb_001266_160 Hb_001517_010 Hb_001517_010 Hb_004979_050--Hb_001517_010 Hb_006472_040 Hb_006472_040 Hb_004979_050--Hb_006472_040 Hb_000679_320--Hb_009393_140 Hb_000679_320--Hb_006472_040 Hb_000107_540 Hb_000107_540 Hb_000679_320--Hb_000107_540 Hb_000679_320--Hb_008112_020 Hb_000252_180 Hb_000252_180 Hb_009393_140--Hb_000252_180 Hb_009393_140--Hb_006472_040 Hb_009393_140--Hb_004979_050 Hb_022693_020 Hb_022693_020 Hb_009393_140--Hb_022693_020 Hb_010721_020 Hb_010721_020 Hb_000723_320--Hb_010721_020 Hb_002475_060 Hb_002475_060 Hb_000723_320--Hb_002475_060 Hb_003605_060 Hb_003605_060 Hb_000723_320--Hb_003605_060 Hb_000208_270 Hb_000208_270 Hb_000723_320--Hb_000208_270 Hb_000723_320--Hb_009393_140 Hb_011900_020 Hb_011900_020 Hb_000359_070--Hb_011900_020 Hb_156850_020 Hb_156850_020 Hb_000359_070--Hb_156850_020 Hb_000359_070--Hb_001266_160 Hb_012940_020 Hb_012940_020 Hb_000359_070--Hb_012940_020 Hb_000038_020 Hb_000038_020 Hb_000359_070--Hb_000038_020 Hb_028960_010 Hb_028960_010 Hb_000359_070--Hb_028960_010 Hb_001541_280 Hb_001541_280 Hb_002814_010--Hb_001541_280 Hb_004934_130 Hb_004934_130 Hb_002814_010--Hb_004934_130 Hb_002814_010--Hb_000679_320 Hb_020141_030 Hb_020141_030 Hb_002814_010--Hb_020141_030 Hb_002814_010--Hb_000208_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.6962 12.7219 27.7156 25.322 2.00744 2.00859
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.33783 2.32963 2.20294 5.34917 119.417

CAGE analysis