Hb_088274_010

Information

Type -
Description -
Location Contig88274: 10874-11425
Sequence    

Annotation

kegg
ID pop:POPTR_0005s15590g
description hypothetical protein
nr
ID XP_012077982.1
description PREDICTED: transcription factor BEE 1-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K9P1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12987 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_088274_010 0.0 - - PREDICTED: transcription factor BEE 1-like [Jatropha curcas]
2 Hb_001221_570 0.216491364 - - -
3 Hb_001414_020 0.2248273909 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
4 Hb_008948_120 0.2253547001 - - PREDICTED: heme oxygenase 1, chloroplastic-like [Jatropha curcas]
5 Hb_050959_010 0.2280196634 - - -
6 Hb_002539_020 0.2318890548 - - hypothetical protein CISIN_1g007216mg [Citrus sinensis]
7 Hb_001776_010 0.2324011225 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
8 Hb_000979_110 0.2339436131 - - PREDICTED: GPI mannosyltransferase 2 [Jatropha curcas]
9 Hb_002627_020 0.2343778065 - - PREDICTED: TBC1 domain family member 2B [Jatropha curcas]
10 Hb_097218_020 0.2363894213 - - PREDICTED: replication protein A 70 kDa DNA-binding subunit E [Jatropha curcas]
11 Hb_001433_110 0.2373187467 - - PREDICTED: uncharacterized protein LOC105647469 isoform X1 [Jatropha curcas]
12 Hb_006384_010 0.2394155353 - - WD-repeat protein, putative [Ricinus communis]
13 Hb_000599_310 0.2418428693 - - PREDICTED: pleckstrin homology domain-containing family A member 8-like [Jatropha curcas]
14 Hb_001500_070 0.2419902165 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000732_190 0.2425522261 - - structural molecule, putative [Ricinus communis]
16 Hb_000031_260 0.2430987229 - - hypothetical protein POPTR_0018s03360g [Populus trichocarpa]
17 Hb_002835_340 0.2435614931 - - PREDICTED: peroxisomal primary amine oxidase [Jatropha curcas]
18 Hb_000135_070 0.2437069436 - - PREDICTED: inositol oxygenase 1-like [Jatropha curcas]
19 Hb_003040_040 0.245347168 - - PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Jatropha curcas]
20 Hb_168893_020 0.2478812303 - - PREDICTED: probable protein S-acyltransferase 15 [Jatropha curcas]

Gene co-expression network

sample Hb_088274_010 Hb_088274_010 Hb_001221_570 Hb_001221_570 Hb_088274_010--Hb_001221_570 Hb_001414_020 Hb_001414_020 Hb_088274_010--Hb_001414_020 Hb_008948_120 Hb_008948_120 Hb_088274_010--Hb_008948_120 Hb_050959_010 Hb_050959_010 Hb_088274_010--Hb_050959_010 Hb_002539_020 Hb_002539_020 Hb_088274_010--Hb_002539_020 Hb_001776_010 Hb_001776_010 Hb_088274_010--Hb_001776_010 Hb_002027_390 Hb_002027_390 Hb_001221_570--Hb_002027_390 Hb_000139_470 Hb_000139_470 Hb_001221_570--Hb_000139_470 Hb_168893_020 Hb_168893_020 Hb_001221_570--Hb_168893_020 Hb_006538_090 Hb_006538_090 Hb_001221_570--Hb_006538_090 Hb_000163_050 Hb_000163_050 Hb_001221_570--Hb_000163_050 Hb_001096_090 Hb_001096_090 Hb_001221_570--Hb_001096_090 Hb_007423_020 Hb_007423_020 Hb_001414_020--Hb_007423_020 Hb_002539_010 Hb_002539_010 Hb_001414_020--Hb_002539_010 Hb_000720_090 Hb_000720_090 Hb_001414_020--Hb_000720_090 Hb_008749_020 Hb_008749_020 Hb_001414_020--Hb_008749_020 Hb_000625_030 Hb_000625_030 Hb_001414_020--Hb_000625_030 Hb_021409_140 Hb_021409_140 Hb_001414_020--Hb_021409_140 Hb_002236_050 Hb_002236_050 Hb_008948_120--Hb_002236_050 Hb_017491_020 Hb_017491_020 Hb_008948_120--Hb_017491_020 Hb_000347_450 Hb_000347_450 Hb_008948_120--Hb_000347_450 Hb_002307_310 Hb_002307_310 Hb_008948_120--Hb_002307_310 Hb_008948_120--Hb_168893_020 Hb_000210_060 Hb_000210_060 Hb_008948_120--Hb_000210_060 Hb_006384_010 Hb_006384_010 Hb_050959_010--Hb_006384_010 Hb_001140_070 Hb_001140_070 Hb_050959_010--Hb_001140_070 Hb_001825_040 Hb_001825_040 Hb_050959_010--Hb_001825_040 Hb_116420_010 Hb_116420_010 Hb_050959_010--Hb_116420_010 Hb_002259_060 Hb_002259_060 Hb_050959_010--Hb_002259_060 Hb_000889_010 Hb_000889_010 Hb_050959_010--Hb_000889_010 Hb_002539_020--Hb_002539_010 Hb_006846_120 Hb_006846_120 Hb_002539_020--Hb_006846_120 Hb_008226_070 Hb_008226_070 Hb_002539_020--Hb_008226_070 Hb_002539_020--Hb_007423_020 Hb_100147_010 Hb_100147_010 Hb_002539_020--Hb_100147_010 Hb_000094_370 Hb_000094_370 Hb_002539_020--Hb_000094_370 Hb_000331_510 Hb_000331_510 Hb_001776_010--Hb_000331_510 Hb_000161_240 Hb_000161_240 Hb_001776_010--Hb_000161_240 Hb_001776_010--Hb_008749_020 Hb_004041_100 Hb_004041_100 Hb_001776_010--Hb_004041_100 Hb_000094_150 Hb_000094_150 Hb_001776_010--Hb_000094_150 Hb_001195_140 Hb_001195_140 Hb_001776_010--Hb_001195_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.169998 1.88898 2.82823 2.26465 0.149729 0.548209
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.67169 3.02127 0 6.16291 1.48074

CAGE analysis