Hb_000625_030

Information

Type -
Description -
Location Contig625: 11752-16676
Sequence    

Annotation

kegg
ID pop:POPTR_0007s09640g
description hypothetical protein
nr
ID XP_012065999.1
description PREDICTED: calmodulin-lysine N-methyltransferase [Jatropha curcas]
swissprot
ID Q3U2J5
description Calmodulin-lysine N-methyltransferase OS=Mus musculus GN=Camkmt PE=1 SV=1
trembl
ID A0A067LEH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06555 PE=4 SV=1
Gene Ontology
ID GO:0009507
description calmodulin-lysine n-methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000625_030 0.0 - - PREDICTED: calmodulin-lysine N-methyltransferase [Jatropha curcas]
2 Hb_008749_020 0.083977629 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004041_100 0.1032455782 - - -
4 Hb_000181_020 0.1111544713 - - PREDICTED: D-amino-acid transaminase, chloroplastic-like [Jatropha curcas]
5 Hb_001500_070 0.1211820137 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001040_150 0.1252180543 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000720_090 0.1272698492 transcription factor TF Family: MYB myb, putative [Ricinus communis]
8 Hb_098533_010 0.1279441256 - - hypothetical protein L484_003492 [Morus notabilis]
9 Hb_000337_010 0.129661122 - - PREDICTED: proteasome activator subunit 4 isoform X2 [Jatropha curcas]
10 Hb_012325_010 0.1321619937 - - hypothetical protein RCOM_0068670 [Ricinus communis]
11 Hb_000173_260 0.1338304725 - - hypothetical protein L484_010046 [Morus notabilis]
12 Hb_006846_120 0.1371923538 - - Succinate/fumarate mitochondrial transporter, putative [Ricinus communis]
13 Hb_002539_010 0.1380430727 - - hypothetical protein JCGZ_15711 [Jatropha curcas]
14 Hb_011360_060 0.1457531506 - - glycogen phosphorylase, putative [Ricinus communis]
15 Hb_000227_330 0.1463755887 - - Acyl-CoA synthetase [Ricinus communis]
16 Hb_000172_280 0.1474281888 - - aspartate aminotransferase, putative [Ricinus communis]
17 Hb_002026_070 0.1476293759 - - hypothetical protein PHAVU_002G2910001g, partial [Phaseolus vulgaris]
18 Hb_007423_020 0.1494805289 - - 2-nitropropane dioxygenase precursor, putative [Ricinus communis]
19 Hb_000347_110 0.1502254666 - - BnaA05g25330D [Brassica napus]
20 Hb_000922_260 0.152380102 - - PREDICTED: pantothenate kinase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000625_030 Hb_000625_030 Hb_008749_020 Hb_008749_020 Hb_000625_030--Hb_008749_020 Hb_004041_100 Hb_004041_100 Hb_000625_030--Hb_004041_100 Hb_000181_020 Hb_000181_020 Hb_000625_030--Hb_000181_020 Hb_001500_070 Hb_001500_070 Hb_000625_030--Hb_001500_070 Hb_001040_150 Hb_001040_150 Hb_000625_030--Hb_001040_150 Hb_000720_090 Hb_000720_090 Hb_000625_030--Hb_000720_090 Hb_008749_020--Hb_004041_100 Hb_000907_150 Hb_000907_150 Hb_008749_020--Hb_000907_150 Hb_000406_090 Hb_000406_090 Hb_008749_020--Hb_000406_090 Hb_008749_020--Hb_000720_090 Hb_008749_020--Hb_001500_070 Hb_000347_110 Hb_000347_110 Hb_004041_100--Hb_000347_110 Hb_004041_100--Hb_000181_020 Hb_000173_260 Hb_000173_260 Hb_004041_100--Hb_000173_260 Hb_004041_100--Hb_001500_070 Hb_000181_020--Hb_000347_110 Hb_011360_060 Hb_011360_060 Hb_000181_020--Hb_011360_060 Hb_006846_120 Hb_006846_120 Hb_000181_020--Hb_006846_120 Hb_000181_020--Hb_001500_070 Hb_003626_050 Hb_003626_050 Hb_001500_070--Hb_003626_050 Hb_002213_090 Hb_002213_090 Hb_001500_070--Hb_002213_090 Hb_001500_070--Hb_000347_110 Hb_012325_010 Hb_012325_010 Hb_001500_070--Hb_012325_010 Hb_006185_030 Hb_006185_030 Hb_001040_150--Hb_006185_030 Hb_009803_020 Hb_009803_020 Hb_001040_150--Hb_009803_020 Hb_098533_010 Hb_098533_010 Hb_001040_150--Hb_098533_010 Hb_007229_050 Hb_007229_050 Hb_001040_150--Hb_007229_050 Hb_178968_080 Hb_178968_080 Hb_001040_150--Hb_178968_080 Hb_000707_010 Hb_000707_010 Hb_000720_090--Hb_000707_010 Hb_000042_380 Hb_000042_380 Hb_000720_090--Hb_000042_380 Hb_002527_060 Hb_002527_060 Hb_000720_090--Hb_002527_060 Hb_008695_150 Hb_008695_150 Hb_000720_090--Hb_008695_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.115549 0.459285 0.777937 0.843862 0.163898 0.13688
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.352697 0.277423 0.128543 2.14219 1.14365

CAGE analysis