Hb_000707_010

Information

Type -
Description -
Location Contig707: 10028-10569
Sequence    

Annotation

kegg
ID rcu:RCOM_2012170
description hypothetical protein
nr
ID KDP24534.1
description hypothetical protein JCGZ_25098 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JYA9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25098 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55135: 10131-10414
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000707_010 0.0 - - hypothetical protein JCGZ_25098 [Jatropha curcas]
2 Hb_000720_090 0.1157868867 transcription factor TF Family: MYB myb, putative [Ricinus communis]
3 Hb_134911_010 0.1378673467 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000077_400 0.1480358662 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
5 Hb_021409_140 0.1639660771 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
6 Hb_000042_380 0.166567021 - - PREDICTED: uncharacterized membrane protein At3g27390 [Jatropha curcas]
7 Hb_001439_040 0.173447473 - - PREDICTED: chorismate mutase 1, chloroplastic [Jatropha curcas]
8 Hb_000009_440 0.1735590757 - - PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]
9 Hb_101449_010 0.1794274685 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
10 Hb_010672_080 0.1817262082 transcription factor TF Family: MYB hypothetical protein JCGZ_00902 [Jatropha curcas]
11 Hb_002739_040 0.1905327439 - - PREDICTED: isocitrate dehydrogenase [NADP] [Jatropha curcas]
12 Hb_002811_020 0.192027682 - - Cysteine synthase [Morus notabilis]
13 Hb_000625_030 0.1921420638 - - PREDICTED: calmodulin-lysine N-methyltransferase [Jatropha curcas]
14 Hb_011537_020 0.1932268403 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
15 Hb_007134_030 0.1933514037 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
16 Hb_001018_080 0.1935836398 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003086_010 0.1936220646 - - hypothetical protein JCGZ_06093 [Jatropha curcas]
18 Hb_001414_020 0.1939916734 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
19 Hb_002186_070 0.1956119673 - - kinase, putative [Ricinus communis]
20 Hb_008695_150 0.1963207065 - - PREDICTED: beta-1,3-galactosyltransferase 7 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000707_010 Hb_000707_010 Hb_000720_090 Hb_000720_090 Hb_000707_010--Hb_000720_090 Hb_134911_010 Hb_134911_010 Hb_000707_010--Hb_134911_010 Hb_000077_400 Hb_000077_400 Hb_000707_010--Hb_000077_400 Hb_021409_140 Hb_021409_140 Hb_000707_010--Hb_021409_140 Hb_000042_380 Hb_000042_380 Hb_000707_010--Hb_000042_380 Hb_001439_040 Hb_001439_040 Hb_000707_010--Hb_001439_040 Hb_000625_030 Hb_000625_030 Hb_000720_090--Hb_000625_030 Hb_008749_020 Hb_008749_020 Hb_000720_090--Hb_008749_020 Hb_000720_090--Hb_000042_380 Hb_002527_060 Hb_002527_060 Hb_000720_090--Hb_002527_060 Hb_008695_150 Hb_008695_150 Hb_000720_090--Hb_008695_150 Hb_117639_010 Hb_117639_010 Hb_134911_010--Hb_117639_010 Hb_134911_010--Hb_000077_400 Hb_134911_010--Hb_001439_040 Hb_000057_100 Hb_000057_100 Hb_134911_010--Hb_000057_100 Hb_134911_010--Hb_000720_090 Hb_003879_020 Hb_003879_020 Hb_000077_400--Hb_003879_020 Hb_001439_010 Hb_001439_010 Hb_000077_400--Hb_001439_010 Hb_006469_090 Hb_006469_090 Hb_000077_400--Hb_006469_090 Hb_001675_270 Hb_001675_270 Hb_000077_400--Hb_001675_270 Hb_005568_050 Hb_005568_050 Hb_000077_400--Hb_005568_050 Hb_003607_140 Hb_003607_140 Hb_000077_400--Hb_003607_140 Hb_000186_290 Hb_000186_290 Hb_021409_140--Hb_000186_290 Hb_000116_120 Hb_000116_120 Hb_021409_140--Hb_000116_120 Hb_021409_140--Hb_000720_090 Hb_003086_010 Hb_003086_010 Hb_021409_140--Hb_003086_010 Hb_172426_050 Hb_172426_050 Hb_021409_140--Hb_172426_050 Hb_000042_380--Hb_008695_150 Hb_005545_020 Hb_005545_020 Hb_000042_380--Hb_005545_020 Hb_007575_030 Hb_007575_030 Hb_000042_380--Hb_007575_030 Hb_001277_400 Hb_001277_400 Hb_000042_380--Hb_001277_400 Hb_000042_380--Hb_005568_050 Hb_004883_020 Hb_004883_020 Hb_000042_380--Hb_004883_020 Hb_001832_110 Hb_001832_110 Hb_001439_040--Hb_001832_110 Hb_001226_100 Hb_001226_100 Hb_001439_040--Hb_001226_100 Hb_002304_190 Hb_002304_190 Hb_001439_040--Hb_002304_190 Hb_000336_280 Hb_000336_280 Hb_001439_040--Hb_000336_280 Hb_002685_100 Hb_002685_100 Hb_001439_040--Hb_002685_100 Hb_000215_130 Hb_000215_130 Hb_001439_040--Hb_000215_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.499505 9.14408 25.6827 20.8785 0.877974 0.773077
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.8607 10.5964 0.202445 44.0446 24.9806

CAGE analysis