Hb_000077_400

Information

Type -
Description -
Location Contig77: 304862-307423
Sequence    

Annotation

kegg
ID rcu:RCOM_1175670
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.10.2)
nr
ID XP_002517950.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q9XID3
description G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=2 SV=1
trembl
ID B9RW31
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_1175670 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at1g34300

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57625: 307064-307337
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000077_400 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_003879_020 0.1257149891 - - PREDICTED: MATE efflux family protein 1-like [Jatropha curcas]
3 Hb_001439_010 0.1274970369 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Jatropha curcas]
4 Hb_006469_090 0.1278397618 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]
5 Hb_001675_270 0.1324851098 - - PREDICTED: probable inactive nicotinamidase At3g16190 [Jatropha curcas]
6 Hb_005568_050 0.1343056441 - - ascorbate peroxidase [Hevea brasiliensis]
7 Hb_003607_140 0.1395845103 - - 3-ketoacyl-CoA thiolase B, putative [Ricinus communis]
8 Hb_000210_040 0.1459958808 - - PREDICTED: putative HVA22-like protein g [Jatropha curcas]
9 Hb_000707_010 0.1480358662 - - hypothetical protein JCGZ_25098 [Jatropha curcas]
10 Hb_007134_030 0.1490228207 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
11 Hb_000042_380 0.1491355996 - - PREDICTED: uncharacterized membrane protein At3g27390 [Jatropha curcas]
12 Hb_010174_180 0.1560591527 - - protein binding protein, putative [Ricinus communis]
13 Hb_000680_070 0.1562780719 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
14 Hb_007850_110 0.1573591392 - - MADS-box transcription factor 3 [Hevea brasiliensis]
15 Hb_000032_600 0.1575681603 - - PREDICTED: B2 protein [Jatropha curcas]
16 Hb_012132_020 0.1581536052 - - glutamine synthetase [Hevea brasiliensis]
17 Hb_004627_020 0.1590619713 - - Protein MLO, putative [Ricinus communis]
18 Hb_187959_010 0.1595631618 - - hypothetical protein JCGZ_12266 [Jatropha curcas]
19 Hb_000202_070 0.1614245866 - - putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus domestica]
20 Hb_004032_110 0.1616713001 - - PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000077_400 Hb_000077_400 Hb_003879_020 Hb_003879_020 Hb_000077_400--Hb_003879_020 Hb_001439_010 Hb_001439_010 Hb_000077_400--Hb_001439_010 Hb_006469_090 Hb_006469_090 Hb_000077_400--Hb_006469_090 Hb_001675_270 Hb_001675_270 Hb_000077_400--Hb_001675_270 Hb_005568_050 Hb_005568_050 Hb_000077_400--Hb_005568_050 Hb_003607_140 Hb_003607_140 Hb_000077_400--Hb_003607_140 Hb_003879_020--Hb_001439_010 Hb_000398_140 Hb_000398_140 Hb_003879_020--Hb_000398_140 Hb_000731_210 Hb_000731_210 Hb_003879_020--Hb_000731_210 Hb_003879_020--Hb_003607_140 Hb_000210_040 Hb_000210_040 Hb_003879_020--Hb_000210_040 Hb_010174_180 Hb_010174_180 Hb_003879_020--Hb_010174_180 Hb_001439_010--Hb_006469_090 Hb_000680_070 Hb_000680_070 Hb_001439_010--Hb_000680_070 Hb_005663_090 Hb_005663_090 Hb_001439_010--Hb_005663_090 Hb_001439_010--Hb_003607_140 Hb_004032_110 Hb_004032_110 Hb_001439_010--Hb_004032_110 Hb_007850_110 Hb_007850_110 Hb_006469_090--Hb_007850_110 Hb_000866_190 Hb_000866_190 Hb_006469_090--Hb_000866_190 Hb_006469_090--Hb_003607_140 Hb_006469_090--Hb_005663_090 Hb_006469_090--Hb_000680_070 Hb_001675_270--Hb_005568_050 Hb_002316_020 Hb_002316_020 Hb_001675_270--Hb_002316_020 Hb_001675_270--Hb_003607_140 Hb_001675_270--Hb_010174_180 Hb_005582_030 Hb_005582_030 Hb_001675_270--Hb_005582_030 Hb_001675_270--Hb_001439_010 Hb_000760_080 Hb_000760_080 Hb_005568_050--Hb_000760_080 Hb_000042_380 Hb_000042_380 Hb_005568_050--Hb_000042_380 Hb_005568_050--Hb_003607_140 Hb_005568_050--Hb_010174_180 Hb_005568_050--Hb_002316_020 Hb_003607_140--Hb_010174_180 Hb_002635_020 Hb_002635_020 Hb_003607_140--Hb_002635_020 Hb_003607_140--Hb_002316_020 Hb_003607_140--Hb_000210_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0263563 2.31008 4.80279 4.31459 0.0146857 0.0137412
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.258078 0.974783 0.180759 5.77844 6.33463

CAGE analysis