Hb_005582_030

Information

Type -
Description -
Location Contig5582: 86857-87531
Sequence    

Annotation

kegg
ID pop:POPTR_0001s03120g
description hypothetical protein
nr
ID XP_012075608.1
description PREDICTED: protein N-lysine methyltransferase METTL21A-like [Jatropha curcas]
swissprot
ID Q8WXB1
description Protein N-lysine methyltransferase METTL21A OS=Homo sapiens GN=METTL21A PE=1 SV=2
trembl
ID A0A067LC29
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11865 PE=4 SV=1
Gene Ontology
ID GO:0016740
description protein n-lysine methyltransferase mettl21a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48610: 86851-87113
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005582_030 0.0 - - PREDICTED: protein N-lysine methyltransferase METTL21A-like [Jatropha curcas]
2 Hb_002316_020 0.1135930774 - - PREDICTED: uncharacterized protein LOC105640407 [Jatropha curcas]
3 Hb_001675_270 0.121977906 - - PREDICTED: probable inactive nicotinamidase At3g16190 [Jatropha curcas]
4 Hb_070136_010 0.1303929471 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
5 Hb_002503_050 0.1323621405 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
6 Hb_000320_450 0.1396307501 - - secretory peroxidase [Hevea brasiliensis]
7 Hb_000230_360 0.1418715668 - - PREDICTED: BI1-like protein [Jatropha curcas]
8 Hb_002635_020 0.1423242741 - - hypothetical protein POPTR_0018s09790g [Populus trichocarpa]
9 Hb_001135_010 0.145413392 - - hypothetical protein CICLE_v10024612mg [Citrus clementina]
10 Hb_010174_180 0.145485197 - - protein binding protein, putative [Ricinus communis]
11 Hb_000046_430 0.1463639177 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
12 Hb_002085_090 0.1472192947 - - -
13 Hb_000689_010 0.1474295346 desease resistance Gene Name: LRR_8 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
14 Hb_000416_190 0.1485255632 - - -
15 Hb_005568_050 0.1488596303 - - ascorbate peroxidase [Hevea brasiliensis]
16 Hb_004855_020 0.1493396485 - - hypothetical protein POPTR_0006s10010g [Populus trichocarpa]
17 Hb_000922_160 0.149787132 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose 5-phosphate reductoisomerase putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis]
18 Hb_000189_160 0.150224171 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
19 Hb_000202_070 0.1506481936 - - putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus domestica]
20 Hb_031385_010 0.1509263832 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]

Gene co-expression network

sample Hb_005582_030 Hb_005582_030 Hb_002316_020 Hb_002316_020 Hb_005582_030--Hb_002316_020 Hb_001675_270 Hb_001675_270 Hb_005582_030--Hb_001675_270 Hb_070136_010 Hb_070136_010 Hb_005582_030--Hb_070136_010 Hb_002503_050 Hb_002503_050 Hb_005582_030--Hb_002503_050 Hb_000320_450 Hb_000320_450 Hb_005582_030--Hb_000320_450 Hb_000230_360 Hb_000230_360 Hb_005582_030--Hb_000230_360 Hb_010174_180 Hb_010174_180 Hb_002316_020--Hb_010174_180 Hb_031385_010 Hb_031385_010 Hb_002316_020--Hb_031385_010 Hb_002316_020--Hb_001675_270 Hb_003607_140 Hb_003607_140 Hb_002316_020--Hb_003607_140 Hb_002316_020--Hb_000230_360 Hb_001048_100 Hb_001048_100 Hb_002316_020--Hb_001048_100 Hb_005568_050 Hb_005568_050 Hb_001675_270--Hb_005568_050 Hb_001675_270--Hb_003607_140 Hb_001675_270--Hb_010174_180 Hb_001439_010 Hb_001439_010 Hb_001675_270--Hb_001439_010 Hb_000185_170 Hb_000185_170 Hb_070136_010--Hb_000185_170 Hb_000922_160 Hb_000922_160 Hb_070136_010--Hb_000922_160 Hb_002078_320 Hb_002078_320 Hb_070136_010--Hb_002078_320 Hb_119066_010 Hb_119066_010 Hb_070136_010--Hb_119066_010 Hb_000037_200 Hb_000037_200 Hb_070136_010--Hb_000037_200 Hb_001629_120 Hb_001629_120 Hb_070136_010--Hb_001629_120 Hb_000189_160 Hb_000189_160 Hb_002503_050--Hb_000189_160 Hb_014250_010 Hb_014250_010 Hb_002503_050--Hb_014250_010 Hb_001345_020 Hb_001345_020 Hb_002503_050--Hb_001345_020 Hb_000046_430 Hb_000046_430 Hb_002503_050--Hb_000046_430 Hb_000760_080 Hb_000760_080 Hb_002503_050--Hb_000760_080 Hb_009554_030 Hb_009554_030 Hb_002503_050--Hb_009554_030 Hb_002849_180 Hb_002849_180 Hb_000320_450--Hb_002849_180 Hb_000096_110 Hb_000096_110 Hb_000320_450--Hb_000096_110 Hb_000007_440 Hb_000007_440 Hb_000320_450--Hb_000007_440 Hb_001195_230 Hb_001195_230 Hb_000320_450--Hb_001195_230 Hb_002838_010 Hb_002838_010 Hb_000320_450--Hb_002838_010 Hb_006970_170 Hb_006970_170 Hb_000320_450--Hb_006970_170 Hb_000061_310 Hb_000061_310 Hb_000230_360--Hb_000061_310 Hb_002301_370 Hb_002301_370 Hb_000230_360--Hb_002301_370 Hb_000230_360--Hb_031385_010 Hb_001440_010 Hb_001440_010 Hb_000230_360--Hb_001440_010 Hb_000834_220 Hb_000834_220 Hb_000230_360--Hb_000834_220 Hb_001019_160 Hb_001019_160 Hb_000230_360--Hb_001019_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.25968 1.79308 4.54093 2.77741 0.0715896 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.340546 0.066925 0 2.182 2.76676

CAGE analysis