Hb_002849_180

Information

Type -
Description -
Location Contig2849: 187665-190322
Sequence    

Annotation

kegg
ID vvi:100261848
description calmodulin-binding receptor-like cytoplasmic kinase 2
nr
ID XP_012083346.1
description PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
swissprot
ID Q8VZJ9
description Calmodulin-binding receptor-like cytoplasmic kinase 2 OS=Arabidopsis thaliana GN=CRCK2 PE=2 SV=1
trembl
ID A0A067JXA7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14372 PE=3 SV=1
Gene Ontology
ID GO:0004674
description calmodulin-binding receptor-like cytoplasmic kinase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29845: 187663-190361
cDNA
(Sanger)
(ID:Location)		 021_J16.ab1: 188987-190354

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002849_180 0.0 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
2 Hb_000007_440 0.0762840505 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
3 Hb_000320_450 0.0984089075 - - secretory peroxidase [Hevea brasiliensis]
4 Hb_006483_090 0.0988684891 - - PREDICTED: uncharacterized protein LOC105639979 [Jatropha curcas]
5 Hb_007483_080 0.1030107159 - - hypothetical protein RCOM_0634810 [Ricinus communis]
6 Hb_000613_250 0.1053516286 - - PREDICTED: nudix hydrolase 2-like [Jatropha curcas]
7 Hb_012308_050 0.106679199 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9-like [Jatropha curcas]
8 Hb_000477_110 0.1108328871 transcription factor TF Family: GRAS PREDICTED: DELLA protein SLR1-like [Jatropha curcas]
9 Hb_001989_070 0.1153554454 - - PREDICTED: uncharacterized calcium-binding protein At1g02270 [Jatropha curcas]
10 Hb_000500_230 0.1159227125 - - hypothetical protein RCOM_0634810 [Ricinus communis]
11 Hb_006970_170 0.1164337781 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
12 Hb_001195_230 0.1240661486 - - PREDICTED: 3-ketoacyl-CoA synthase 4 [Jatropha curcas]
13 Hb_000230_360 0.1254117171 - - PREDICTED: BI1-like protein [Jatropha curcas]
14 Hb_002344_080 0.1256484668 - - PREDICTED: protein YLS2-like [Populus euphratica]
15 Hb_001689_030 0.1286721688 - - PREDICTED: J domain-containing protein required for chloroplast accumulation response 1 [Jatropha curcas]
16 Hb_001158_120 0.1302186628 - - PREDICTED: uncharacterized protein LOC105648761 isoform X1 [Jatropha curcas]
17 Hb_005724_040 0.1304739705 - - hypothetical protein JCGZ_13142 [Jatropha curcas]
18 Hb_001357_060 0.1305377329 transcription factor TF Family: Orphans PREDICTED: B-box zinc finger protein 18-like [Cicer arietinum]
19 Hb_000366_050 0.132585976 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
20 Hb_002510_100 0.133260405 - - Root phototropism protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002849_180 Hb_002849_180 Hb_000007_440 Hb_000007_440 Hb_002849_180--Hb_000007_440 Hb_000320_450 Hb_000320_450 Hb_002849_180--Hb_000320_450 Hb_006483_090 Hb_006483_090 Hb_002849_180--Hb_006483_090 Hb_007483_080 Hb_007483_080 Hb_002849_180--Hb_007483_080 Hb_000613_250 Hb_000613_250 Hb_002849_180--Hb_000613_250 Hb_012308_050 Hb_012308_050 Hb_002849_180--Hb_012308_050 Hb_000007_440--Hb_007483_080 Hb_002010_100 Hb_002010_100 Hb_000007_440--Hb_002010_100 Hb_000007_440--Hb_006483_090 Hb_001158_120 Hb_001158_120 Hb_000007_440--Hb_001158_120 Hb_006970_170 Hb_006970_170 Hb_000007_440--Hb_006970_170 Hb_000096_110 Hb_000096_110 Hb_000320_450--Hb_000096_110 Hb_000320_450--Hb_000007_440 Hb_001195_230 Hb_001195_230 Hb_000320_450--Hb_001195_230 Hb_002838_010 Hb_002838_010 Hb_000320_450--Hb_002838_010 Hb_000320_450--Hb_006970_170 Hb_000477_110 Hb_000477_110 Hb_006483_090--Hb_000477_110 Hb_006269_010 Hb_006269_010 Hb_006483_090--Hb_006269_010 Hb_001153_090 Hb_001153_090 Hb_006483_090--Hb_001153_090 Hb_006483_090--Hb_007483_080 Hb_007483_080--Hb_002010_100 Hb_002361_010 Hb_002361_010 Hb_007483_080--Hb_002361_010 Hb_007483_080--Hb_001158_120 Hb_000500_230 Hb_000500_230 Hb_007483_080--Hb_000500_230 Hb_000342_020 Hb_000342_020 Hb_000613_250--Hb_000342_020 Hb_000472_020 Hb_000472_020 Hb_000613_250--Hb_000472_020 Hb_004421_010 Hb_004421_010 Hb_000613_250--Hb_004421_010 Hb_000613_250--Hb_000477_110 Hb_001013_050 Hb_001013_050 Hb_000613_250--Hb_001013_050 Hb_144703_010 Hb_144703_010 Hb_000613_250--Hb_144703_010 Hb_007483_120 Hb_007483_120 Hb_012308_050--Hb_007483_120 Hb_002510_100 Hb_002510_100 Hb_012308_050--Hb_002510_100 Hb_000654_050 Hb_000654_050 Hb_012308_050--Hb_000654_050 Hb_005724_040 Hb_005724_040 Hb_012308_050--Hb_005724_040 Hb_000320_270 Hb_000320_270 Hb_012308_050--Hb_000320_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.12161 22.9535 23.0371 21.9249 0.986481 1.4903
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.217599 0.192602 0 11.3521 19.432

CAGE analysis