Hb_000116_120

Information

Type -
Description -
Location Contig116: 116474-117028
Sequence    

Annotation

kegg
ID rcu:RCOM_0873960
description Disease resistance response protein, putative
nr
ID XP_012065378.1
description PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
swissprot
ID P13240
description Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=1 SV=2
trembl
ID A0A067LHU2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22386 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000116_120 0.0 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
2 Hb_003086_010 0.1479324701 - - hypothetical protein JCGZ_06093 [Jatropha curcas]
3 Hb_000186_290 0.1514111332 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 [Jatropha curcas]
4 Hb_078081_010 0.154298332 - - hypothetical protein PRUPE_ppa015726mg [Prunus persica]
5 Hb_021409_140 0.1634781409 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
6 Hb_000653_010 0.1636902309 - - hypothetical protein CICLE_v10033238mg [Citrus clementina]
7 Hb_001474_010 0.1647067427 - - PREDICTED: synaptotagmin-3 isoform X1 [Jatropha curcas]
8 Hb_008066_060 0.1665364511 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT1.6 [Jatropha curcas]
9 Hb_001006_310 0.169204532 - - PREDICTED: uncharacterized protein LOC105634192 [Jatropha curcas]
10 Hb_006141_030 0.1728904072 - - -
11 Hb_000720_090 0.172925736 transcription factor TF Family: MYB myb, putative [Ricinus communis]
12 Hb_006916_020 0.1800224146 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
13 Hb_008226_020 0.1816061235 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
14 Hb_172426_050 0.1843586123 - - PREDICTED: uncharacterized protein LOC105634266 [Jatropha curcas]
15 Hb_000005_230 0.1881880984 - - hypothetical protein POPTR_0009s01160g [Populus trichocarpa]
16 Hb_002475_030 0.1892503631 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003398_090 0.1901589441 - - PREDICTED: expansin-A4 [Jatropha curcas]
18 Hb_000139_500 0.1902303728 - - PREDICTED: putative uncharacterized protein DDB_G0286901 [Prunus mume]
19 Hb_130563_010 0.1924903295 - - PREDICTED: ABC transporter C family member 3-like isoform X1 [Jatropha curcas]
20 Hb_003160_050 0.192592498 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]

Gene co-expression network

sample Hb_000116_120 Hb_000116_120 Hb_003086_010 Hb_003086_010 Hb_000116_120--Hb_003086_010 Hb_000186_290 Hb_000186_290 Hb_000116_120--Hb_000186_290 Hb_078081_010 Hb_078081_010 Hb_000116_120--Hb_078081_010 Hb_021409_140 Hb_021409_140 Hb_000116_120--Hb_021409_140 Hb_000653_010 Hb_000653_010 Hb_000116_120--Hb_000653_010 Hb_001474_010 Hb_001474_010 Hb_000116_120--Hb_001474_010 Hb_172426_050 Hb_172426_050 Hb_003086_010--Hb_172426_050 Hb_000720_090 Hb_000720_090 Hb_003086_010--Hb_000720_090 Hb_003086_010--Hb_021409_140 Hb_003086_010--Hb_078081_010 Hb_001405_150 Hb_001405_150 Hb_003086_010--Hb_001405_150 Hb_000186_290--Hb_078081_010 Hb_002739_040 Hb_002739_040 Hb_000186_290--Hb_002739_040 Hb_164926_040 Hb_164926_040 Hb_000186_290--Hb_164926_040 Hb_004346_010 Hb_004346_010 Hb_000186_290--Hb_004346_010 Hb_000186_290--Hb_021409_140 Hb_078081_010--Hb_002739_040 Hb_001040_200 Hb_001040_200 Hb_078081_010--Hb_001040_200 Hb_000834_040 Hb_000834_040 Hb_078081_010--Hb_000834_040 Hb_002307_010 Hb_002307_010 Hb_078081_010--Hb_002307_010 Hb_001663_120 Hb_001663_120 Hb_078081_010--Hb_001663_120 Hb_000707_010 Hb_000707_010 Hb_021409_140--Hb_000707_010 Hb_021409_140--Hb_000720_090 Hb_021409_140--Hb_172426_050 Hb_008066_060 Hb_008066_060 Hb_000653_010--Hb_008066_060 Hb_130563_010 Hb_130563_010 Hb_000653_010--Hb_130563_010 Hb_012753_190 Hb_012753_190 Hb_000653_010--Hb_012753_190 Hb_000836_480 Hb_000836_480 Hb_000653_010--Hb_000836_480 Hb_008226_020 Hb_008226_020 Hb_000653_010--Hb_008226_020 Hb_000138_020 Hb_000138_020 Hb_000653_010--Hb_000138_020 Hb_002272_230 Hb_002272_230 Hb_001474_010--Hb_002272_230 Hb_000473_070 Hb_000473_070 Hb_001474_010--Hb_000473_070 Hb_025526_080 Hb_025526_080 Hb_001474_010--Hb_025526_080 Hb_002301_250 Hb_002301_250 Hb_001474_010--Hb_002301_250 Hb_080147_060 Hb_080147_060 Hb_001474_010--Hb_080147_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.124246 0.425734 1.603 2.50624 0.147418 0.0872004
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.340957 0.178612 0 6.69958 1.53474

CAGE analysis