Hb_000138_020

Information

Type -
Description -
Location Contig138: 94007-95492
Sequence    

Annotation

kegg
ID rcu:RCOM_0504470
description Peroxidase 53 precursor, putative (EC:1.11.1.7)
nr
ID XP_012087811.1
description PREDICTED: peroxidase A2-like [Jatropha curcas]
swissprot
ID Q9LEH3
description Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1
trembl
ID A0A067JXB5
description Peroxidase OS=Jatropha curcas GN=JCGZ_25556 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase a2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10478: 94000-95578
cDNA
(Sanger)
(ID:Location)		 039_B21.ab1: 94005-94528

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000138_020 0.0 - - PREDICTED: peroxidase A2-like [Jatropha curcas]
2 Hb_000653_010 0.1436857499 - - hypothetical protein CICLE_v10033238mg [Citrus clementina]
3 Hb_001123_010 0.1533258885 - - conserved hypothetical protein [Ricinus communis]
4 Hb_033594_100 0.1541413102 transcription factor TF Family: GNAT PREDICTED: probable amino-acid acetyltransferase NAGS1, chloroplastic isoform X1 [Jatropha curcas]
5 Hb_032225_040 0.1570922723 - - -
6 Hb_000816_020 0.1696799994 desease resistance Gene Name: NB-ARC unnamed protein product [Coffea canephora]
7 Hb_003640_010 0.1716310102 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
8 Hb_002026_080 0.1824573944 desease resistance Gene Name: TIR_2 nucleoside-triphosphatase, putative [Ricinus communis]
9 Hb_130563_010 0.1886733648 - - PREDICTED: ABC transporter C family member 3-like isoform X1 [Jatropha curcas]
10 Hb_001430_090 0.1925143491 - - hypothetical protein JCGZ_05131 [Jatropha curcas]
11 Hb_011360_060 0.1943250476 - - glycogen phosphorylase, putative [Ricinus communis]
12 Hb_000834_040 0.1983298084 - - PREDICTED: ras-related protein Rab7 [Cucumis melo]
13 Hb_000661_230 0.199344321 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X2 [Jatropha curcas]
14 Hb_000453_240 0.2001374772 rubber biosynthesis Gene Name: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [Hevea brasiliensis]
15 Hb_003085_080 0.2006104921 - - nucleic acid binding protein, putative [Ricinus communis]
16 Hb_001004_100 0.2019773794 - - ATP binding protein, putative [Ricinus communis]
17 Hb_000046_610 0.2025979807 - - PREDICTED: putative cullin-like protein 2 isoform X3 [Populus euphratica]
18 Hb_003562_030 0.2034261449 - - -
19 Hb_001493_020 0.2046252654 - - leucine-rich repeat receptor-like protein kinase [Manihot esculenta]
20 Hb_010068_050 0.2048763307 - - PREDICTED: uncharacterized protein LOC105632963 [Jatropha curcas]

Gene co-expression network

sample Hb_000138_020 Hb_000138_020 Hb_000653_010 Hb_000653_010 Hb_000138_020--Hb_000653_010 Hb_001123_010 Hb_001123_010 Hb_000138_020--Hb_001123_010 Hb_033594_100 Hb_033594_100 Hb_000138_020--Hb_033594_100 Hb_032225_040 Hb_032225_040 Hb_000138_020--Hb_032225_040 Hb_000816_020 Hb_000816_020 Hb_000138_020--Hb_000816_020 Hb_003640_010 Hb_003640_010 Hb_000138_020--Hb_003640_010 Hb_008066_060 Hb_008066_060 Hb_000653_010--Hb_008066_060 Hb_130563_010 Hb_130563_010 Hb_000653_010--Hb_130563_010 Hb_012753_190 Hb_012753_190 Hb_000653_010--Hb_012753_190 Hb_000836_480 Hb_000836_480 Hb_000653_010--Hb_000836_480 Hb_008226_020 Hb_008226_020 Hb_000653_010--Hb_008226_020 Hb_001004_100 Hb_001004_100 Hb_001123_010--Hb_001004_100 Hb_006141_030 Hb_006141_030 Hb_001123_010--Hb_006141_030 Hb_000453_240 Hb_000453_240 Hb_001123_010--Hb_000453_240 Hb_002026_080 Hb_002026_080 Hb_001123_010--Hb_002026_080 Hb_001123_010--Hb_012753_190 Hb_002518_180 Hb_002518_180 Hb_033594_100--Hb_002518_180 Hb_011853_010 Hb_011853_010 Hb_033594_100--Hb_011853_010 Hb_001040_150 Hb_001040_150 Hb_033594_100--Hb_001040_150 Hb_001677_230 Hb_001677_230 Hb_033594_100--Hb_001677_230 Hb_101449_010 Hb_101449_010 Hb_033594_100--Hb_101449_010 Hb_082683_010 Hb_082683_010 Hb_033594_100--Hb_082683_010 Hb_011200_020 Hb_011200_020 Hb_032225_040--Hb_011200_020 Hb_000098_310 Hb_000098_310 Hb_032225_040--Hb_000098_310 Hb_000300_590 Hb_000300_590 Hb_032225_040--Hb_000300_590 Hb_002835_350 Hb_002835_350 Hb_032225_040--Hb_002835_350 Hb_032631_050 Hb_032631_050 Hb_032225_040--Hb_032631_050 Hb_000816_020--Hb_082683_010 Hb_006096_020 Hb_006096_020 Hb_000816_020--Hb_006096_020 Hb_000816_020--Hb_001677_230 Hb_002420_010 Hb_002420_010 Hb_000816_020--Hb_002420_010 Hb_000816_020--Hb_033594_100 Hb_000811_010 Hb_000811_010 Hb_000816_020--Hb_000811_010 Hb_013848_030 Hb_013848_030 Hb_003640_010--Hb_013848_030 Hb_000120_880 Hb_000120_880 Hb_003640_010--Hb_000120_880 Hb_003085_080 Hb_003085_080 Hb_003640_010--Hb_003085_080 Hb_000445_030 Hb_000445_030 Hb_003640_010--Hb_000445_030 Hb_002448_020 Hb_002448_020 Hb_003640_010--Hb_002448_020 Hb_002622_010 Hb_002622_010 Hb_003640_010--Hb_002622_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.32508 8.19847 4.39028 17.8513 0.26233 0.269062
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.08062 0.975702 2.98784 47.8381 17.794

CAGE analysis