Hb_000120_880

Information

Type -
Description -
Location Contig120: 680112-680663
Sequence    

Annotation

kegg
ID rcu:RCOM_0873960
description Disease resistance response protein, putative
nr
ID XP_012065378.1
description PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
swissprot
ID Q9SH66
description Dirigent protein 5 OS=Arabidopsis thaliana GN=DIR5 PE=2 SV=1
trembl
ID A0A067LHU2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22386 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_880 0.0 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
2 Hb_003640_010 0.1114984205 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
3 Hb_001607_070 0.1153693945 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
4 Hb_000254_060 0.1416176996 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001778_040 0.1430348865 - - hypothetical protein VITISV_021035 [Vitis vinifera]
6 Hb_168319_060 0.1449219244 - - PREDICTED: cytochrome P450 CYP749A22-like [Populus euphratica]
7 Hb_170878_060 0.1465778488 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
8 Hb_000970_020 0.1467967139 - - hypothetical protein POPTR_0005s19050g [Populus trichocarpa]
9 Hb_003398_090 0.1491682064 - - PREDICTED: expansin-A4 [Jatropha curcas]
10 Hb_000751_060 0.1493797595 - - PREDICTED: extensin-2-like, partial [Sesamum indicum]
11 Hb_000009_430 0.1495543568 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001430_090 0.1501877663 - - hypothetical protein JCGZ_05131 [Jatropha curcas]
13 Hb_172939_010 0.1509737872 - - unknown [Picea sitchensis]
14 Hb_002622_010 0.1533542109 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
15 Hb_029510_090 0.1558369908 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
16 Hb_003992_220 0.1564806398 - - s-receptor kinase, putative [Ricinus communis]
17 Hb_006594_080 0.156719894 - - beta-glucosidase, putative [Ricinus communis]
18 Hb_001622_020 0.15787178 - - -
19 Hb_013848_030 0.1584262126 - - PREDICTED: probable aminotransferase TAT2 [Jatropha curcas]
20 Hb_002448_020 0.1591837479 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000120_880 Hb_000120_880 Hb_003640_010 Hb_003640_010 Hb_000120_880--Hb_003640_010 Hb_001607_070 Hb_001607_070 Hb_000120_880--Hb_001607_070 Hb_000254_060 Hb_000254_060 Hb_000120_880--Hb_000254_060 Hb_001778_040 Hb_001778_040 Hb_000120_880--Hb_001778_040 Hb_168319_060 Hb_168319_060 Hb_000120_880--Hb_168319_060 Hb_170878_060 Hb_170878_060 Hb_000120_880--Hb_170878_060 Hb_013848_030 Hb_013848_030 Hb_003640_010--Hb_013848_030 Hb_003085_080 Hb_003085_080 Hb_003640_010--Hb_003085_080 Hb_000445_030 Hb_000445_030 Hb_003640_010--Hb_000445_030 Hb_002448_020 Hb_002448_020 Hb_003640_010--Hb_002448_020 Hb_002622_010 Hb_002622_010 Hb_003640_010--Hb_002622_010 Hb_001607_070--Hb_002622_010 Hb_001607_070--Hb_170878_060 Hb_000597_080 Hb_000597_080 Hb_001607_070--Hb_000597_080 Hb_002308_060 Hb_002308_060 Hb_001607_070--Hb_002308_060 Hb_001607_070--Hb_001778_040 Hb_001622_020 Hb_001622_020 Hb_000254_060--Hb_001622_020 Hb_000254_060--Hb_001778_040 Hb_000254_060--Hb_168319_060 Hb_065521_010 Hb_065521_010 Hb_000254_060--Hb_065521_010 Hb_029510_090 Hb_029510_090 Hb_000254_060--Hb_029510_090 Hb_000054_130 Hb_000054_130 Hb_000254_060--Hb_000054_130 Hb_001778_040--Hb_001622_020 Hb_001778_040--Hb_000054_130 Hb_167211_010 Hb_167211_010 Hb_001778_040--Hb_167211_010 Hb_003992_220 Hb_003992_220 Hb_001778_040--Hb_003992_220 Hb_001629_050 Hb_001629_050 Hb_001778_040--Hb_001629_050 Hb_007875_020 Hb_007875_020 Hb_168319_060--Hb_007875_020 Hb_168319_060--Hb_065521_010 Hb_004943_010 Hb_004943_010 Hb_168319_060--Hb_004943_010 Hb_060152_010 Hb_060152_010 Hb_168319_060--Hb_060152_010 Hb_168319_060--Hb_029510_090 Hb_170878_060--Hb_003992_220 Hb_007676_060 Hb_007676_060 Hb_170878_060--Hb_007676_060 Hb_038833_010 Hb_038833_010 Hb_170878_060--Hb_038833_010 Hb_170878_060--Hb_002308_060 Hb_170878_060--Hb_000597_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.64829 1.81955 8.18327 0 0.0439668
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.180117 0.310863 13.5916 9.79204

CAGE analysis