Hb_001607_070

Information

Type -
Description -
Location Contig1607: 79592-82753
Sequence    

Annotation

kegg
ID pmum:103330656
description LRR receptor-like serine/threonine-protein kinase GSO2
nr
ID KDP35941.1
description hypothetical protein JCGZ_09913 [Jatropha curcas]
swissprot
ID Q9FL28
description LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
trembl
ID A0A067KI84
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09913 PE=4 SV=1
Gene Ontology
ID GO:0016491
description serine threonine-protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001607_070 0.0 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
2 Hb_002622_010 0.0912729193 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
3 Hb_170878_060 0.0997511108 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
4 Hb_000597_080 0.1042588759 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
5 Hb_000120_880 0.1153693945 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
6 Hb_002308_060 0.1251054427 - - PREDICTED: cytochrome P450 704C1-like [Jatropha curcas]
7 Hb_001778_040 0.1266810097 - - hypothetical protein VITISV_021035 [Vitis vinifera]
8 Hb_003992_220 0.1285373665 - - s-receptor kinase, putative [Ricinus communis]
9 Hb_004307_070 0.1309598767 - - kinase, putative [Ricinus communis]
10 Hb_000917_120 0.1353197808 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000258_210 0.1371539609 - - prenyl-dependent CAAX protease, putative [Ricinus communis]
12 Hb_002490_090 0.1385405428 - - PREDICTED: uncharacterized protein LOC105133003 [Populus euphratica]
13 Hb_000347_420 0.139892549 - - hypothetical protein JCGZ_24696 [Jatropha curcas]
14 Hb_006120_030 0.1432212238 - - -
15 Hb_001660_050 0.144303473 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Eucalyptus grandis]
16 Hb_000155_040 0.144371896 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
17 Hb_172633_020 0.146156267 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Populus euphratica]
18 Hb_009659_040 0.1463128354 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER [Populus euphratica]
19 Hb_138606_020 0.1496553368 - - Nitrate transporter2.5 [Theobroma cacao]
20 Hb_003640_010 0.1522084709 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]

Gene co-expression network

sample Hb_001607_070 Hb_001607_070 Hb_002622_010 Hb_002622_010 Hb_001607_070--Hb_002622_010 Hb_170878_060 Hb_170878_060 Hb_001607_070--Hb_170878_060 Hb_000597_080 Hb_000597_080 Hb_001607_070--Hb_000597_080 Hb_000120_880 Hb_000120_880 Hb_001607_070--Hb_000120_880 Hb_002308_060 Hb_002308_060 Hb_001607_070--Hb_002308_060 Hb_001778_040 Hb_001778_040 Hb_001607_070--Hb_001778_040 Hb_001660_050 Hb_001660_050 Hb_002622_010--Hb_001660_050 Hb_004943_010 Hb_004943_010 Hb_002622_010--Hb_004943_010 Hb_009659_040 Hb_009659_040 Hb_002622_010--Hb_009659_040 Hb_000203_080 Hb_000203_080 Hb_002622_010--Hb_000203_080 Hb_029576_080 Hb_029576_080 Hb_002622_010--Hb_029576_080 Hb_003992_220 Hb_003992_220 Hb_170878_060--Hb_003992_220 Hb_007676_060 Hb_007676_060 Hb_170878_060--Hb_007676_060 Hb_038833_010 Hb_038833_010 Hb_170878_060--Hb_038833_010 Hb_170878_060--Hb_002308_060 Hb_170878_060--Hb_000597_080 Hb_000917_120 Hb_000917_120 Hb_000597_080--Hb_000917_120 Hb_000597_080--Hb_009659_040 Hb_008111_010 Hb_008111_010 Hb_000597_080--Hb_008111_010 Hb_006120_030 Hb_006120_030 Hb_000597_080--Hb_006120_030 Hb_000264_340 Hb_000264_340 Hb_000597_080--Hb_000264_340 Hb_003640_010 Hb_003640_010 Hb_000120_880--Hb_003640_010 Hb_000254_060 Hb_000254_060 Hb_000120_880--Hb_000254_060 Hb_000120_880--Hb_001778_040 Hb_168319_060 Hb_168319_060 Hb_000120_880--Hb_168319_060 Hb_000120_880--Hb_170878_060 Hb_002308_060--Hb_003992_220 Hb_002308_060--Hb_000597_080 Hb_001963_110 Hb_001963_110 Hb_002308_060--Hb_001963_110 Hb_092029_010 Hb_092029_010 Hb_002308_060--Hb_092029_010 Hb_001622_020 Hb_001622_020 Hb_001778_040--Hb_001622_020 Hb_000054_130 Hb_000054_130 Hb_001778_040--Hb_000054_130 Hb_167211_010 Hb_167211_010 Hb_001778_040--Hb_167211_010 Hb_001778_040--Hb_000254_060 Hb_001778_040--Hb_003992_220 Hb_001629_050 Hb_001629_050 Hb_001778_040--Hb_001629_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.010964 0.00471546 0.0179978 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0299745 0.0230631

CAGE analysis