Hb_000917_120

Information

Type -
Description -
Location Contig917: 160291-161085
Sequence    

Annotation

kegg
ID rcu:RCOM_0704460
description hypothetical protein
nr
ID XP_002524384.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID O22227
description Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1
trembl
ID B9SEG5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0704460 PE=4 SV=1
Gene Ontology
ID GO:0009506
description protein mizu-kussei 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000917_120 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_006120_030 0.0446948214 - - -
3 Hb_009659_040 0.0706119293 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER [Populus euphratica]
4 Hb_029576_080 0.0908821793 - - Aspartic proteinase precursor, putative [Ricinus communis]
5 Hb_000597_080 0.092950133 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
6 Hb_000011_120 0.0960487113 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
7 Hb_001660_050 0.103047202 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Eucalyptus grandis]
8 Hb_002490_090 0.1072364764 - - PREDICTED: uncharacterized protein LOC105133003 [Populus euphratica]
9 Hb_138606_020 0.1086026708 - - Nitrate transporter2.5 [Theobroma cacao]
10 Hb_003767_010 0.1120388775 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
11 Hb_054865_030 0.1147443465 - - -
12 Hb_002622_010 0.1173492802 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
13 Hb_029866_110 0.1192951424 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 10-like [Jatropha curcas]
14 Hb_170878_050 0.1245497142 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
15 Hb_175758_010 0.1253116886 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
16 Hb_001329_110 0.1335105231 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
17 Hb_000840_050 0.1339610687 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
18 Hb_007123_020 0.1344383699 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
19 Hb_001607_070 0.1353197808 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
20 Hb_172633_020 0.1371813605 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Populus euphratica]

Gene co-expression network

sample Hb_000917_120 Hb_000917_120 Hb_006120_030 Hb_006120_030 Hb_000917_120--Hb_006120_030 Hb_009659_040 Hb_009659_040 Hb_000917_120--Hb_009659_040 Hb_029576_080 Hb_029576_080 Hb_000917_120--Hb_029576_080 Hb_000597_080 Hb_000597_080 Hb_000917_120--Hb_000597_080 Hb_000011_120 Hb_000011_120 Hb_000917_120--Hb_000011_120 Hb_001660_050 Hb_001660_050 Hb_000917_120--Hb_001660_050 Hb_002490_090 Hb_002490_090 Hb_006120_030--Hb_002490_090 Hb_054865_030 Hb_054865_030 Hb_006120_030--Hb_054865_030 Hb_006120_030--Hb_000011_120 Hb_006120_030--Hb_009659_040 Hb_172633_020 Hb_172633_020 Hb_006120_030--Hb_172633_020 Hb_009659_040--Hb_001660_050 Hb_138606_020 Hb_138606_020 Hb_009659_040--Hb_138606_020 Hb_170878_050 Hb_170878_050 Hb_009659_040--Hb_170878_050 Hb_000840_050 Hb_000840_050 Hb_009659_040--Hb_000840_050 Hb_029866_110 Hb_029866_110 Hb_009659_040--Hb_029866_110 Hb_029576_080--Hb_001660_050 Hb_010839_010 Hb_010839_010 Hb_029576_080--Hb_010839_010 Hb_029576_080--Hb_009659_040 Hb_029576_080--Hb_000011_120 Hb_029576_080--Hb_170878_050 Hb_001607_070 Hb_001607_070 Hb_000597_080--Hb_001607_070 Hb_000597_080--Hb_009659_040 Hb_008111_010 Hb_008111_010 Hb_000597_080--Hb_008111_010 Hb_000597_080--Hb_006120_030 Hb_000264_340 Hb_000264_340 Hb_000597_080--Hb_000264_340 Hb_001329_110 Hb_001329_110 Hb_000011_120--Hb_001329_110 Hb_009627_040 Hb_009627_040 Hb_000011_120--Hb_009627_040 Hb_175758_010 Hb_175758_010 Hb_000011_120--Hb_175758_010 Hb_005211_090 Hb_005211_090 Hb_000011_120--Hb_005211_090 Hb_000011_120--Hb_010839_010 Hb_001318_120 Hb_001318_120 Hb_000011_120--Hb_001318_120 Hb_001660_050--Hb_170878_050 Hb_002622_010 Hb_002622_010 Hb_001660_050--Hb_002622_010 Hb_001660_050--Hb_029866_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.575946 0.18349 0.367536 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.0398 0.536712

CAGE analysis