Hb_006141_030

Information

Type -
Description -
Location Contig6141: 32075-34960
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006141_030 0.0 - - -
2 Hb_012753_190 0.1511097063 - - PREDICTED: protein HAPLESS 2 [Populus euphratica]
3 Hb_012545_090 0.1595401412 - - hypothetical protein JCGZ_04320 [Jatropha curcas]
4 Hb_002835_350 0.1606369156 - - PREDICTED: uncharacterized protein LOC105640319 [Jatropha curcas]
5 Hb_001123_010 0.164546395 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002539_010 0.1697843029 - - hypothetical protein JCGZ_15711 [Jatropha curcas]
7 Hb_000116_120 0.1728904072 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
8 Hb_001474_010 0.1738456784 - - PREDICTED: synaptotagmin-3 isoform X1 [Jatropha curcas]
9 Hb_000625_030 0.1774175378 - - PREDICTED: calmodulin-lysine N-methyltransferase [Jatropha curcas]
10 Hb_000173_260 0.1782211794 - - hypothetical protein L484_010046 [Morus notabilis]
11 Hb_003972_060 0.178713172 - - PREDICTED: UDP-arabinopyranose mutase 3 [Populus euphratica]
12 Hb_000720_090 0.1833177279 transcription factor TF Family: MYB myb, putative [Ricinus communis]
13 Hb_001414_020 0.1845451735 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
14 Hb_007423_020 0.1846166624 - - 2-nitropropane dioxygenase precursor, putative [Ricinus communis]
15 Hb_011360_060 0.1874658339 - - glycogen phosphorylase, putative [Ricinus communis]
16 Hb_001004_100 0.1876424856 - - ATP binding protein, putative [Ricinus communis]
17 Hb_004041_100 0.188409065 - - -
18 Hb_003813_120 0.1901510652 - - zinc finger protein, putative [Ricinus communis]
19 Hb_008749_020 0.1903063625 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000330_150 0.1923870594 - - PREDICTED: dihydroflavonol-4-reductase-like [Jatropha curcas]

Gene co-expression network

sample Hb_006141_030 Hb_006141_030 Hb_012753_190 Hb_012753_190 Hb_006141_030--Hb_012753_190 Hb_012545_090 Hb_012545_090 Hb_006141_030--Hb_012545_090 Hb_002835_350 Hb_002835_350 Hb_006141_030--Hb_002835_350 Hb_001123_010 Hb_001123_010 Hb_006141_030--Hb_001123_010 Hb_002539_010 Hb_002539_010 Hb_006141_030--Hb_002539_010 Hb_000116_120 Hb_000116_120 Hb_006141_030--Hb_000116_120 Hb_000653_010 Hb_000653_010 Hb_012753_190--Hb_000653_010 Hb_001004_100 Hb_001004_100 Hb_012753_190--Hb_001004_100 Hb_007101_210 Hb_007101_210 Hb_012753_190--Hb_007101_210 Hb_000230_230 Hb_000230_230 Hb_012753_190--Hb_000230_230 Hb_001268_330 Hb_001268_330 Hb_012753_190--Hb_001268_330 Hb_000227_040 Hb_000227_040 Hb_012545_090--Hb_000227_040 Hb_008226_070 Hb_008226_070 Hb_012545_090--Hb_008226_070 Hb_012760_040 Hb_012760_040 Hb_012545_090--Hb_012760_040 Hb_004129_050 Hb_004129_050 Hb_012545_090--Hb_004129_050 Hb_000702_060 Hb_000702_060 Hb_012545_090--Hb_000702_060 Hb_009732_020 Hb_009732_020 Hb_012545_090--Hb_009732_020 Hb_032631_050 Hb_032631_050 Hb_002835_350--Hb_032631_050 Hb_002835_350--Hb_002539_010 Hb_000116_590 Hb_000116_590 Hb_002835_350--Hb_000116_590 Hb_011200_020 Hb_011200_020 Hb_002835_350--Hb_011200_020 Hb_000098_310 Hb_000098_310 Hb_002835_350--Hb_000098_310 Hb_001123_010--Hb_001004_100 Hb_000138_020 Hb_000138_020 Hb_001123_010--Hb_000138_020 Hb_000453_240 Hb_000453_240 Hb_001123_010--Hb_000453_240 Hb_002026_080 Hb_002026_080 Hb_001123_010--Hb_002026_080 Hb_001123_010--Hb_012753_190 Hb_011633_040 Hb_011633_040 Hb_002539_010--Hb_011633_040 Hb_002539_020 Hb_002539_020 Hb_002539_010--Hb_002539_020 Hb_000337_010 Hb_000337_010 Hb_002539_010--Hb_000337_010 Hb_000625_030 Hb_000625_030 Hb_002539_010--Hb_000625_030 Hb_001500_070 Hb_001500_070 Hb_002539_010--Hb_001500_070 Hb_002539_010--Hb_008226_070 Hb_003086_010 Hb_003086_010 Hb_000116_120--Hb_003086_010 Hb_000186_290 Hb_000186_290 Hb_000116_120--Hb_000186_290 Hb_078081_010 Hb_078081_010 Hb_000116_120--Hb_078081_010 Hb_021409_140 Hb_021409_140 Hb_000116_120--Hb_021409_140 Hb_000116_120--Hb_000653_010 Hb_001474_010 Hb_001474_010 Hb_000116_120--Hb_001474_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.513024 1.39332 4.61645 5.77677 0.727277 0.795835
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.24618 1.16865 1.73972 19.3696 3.71345

CAGE analysis