Hb_003086_010

Information

Type -
Description -
Location Contig3086: 1477-1815
Sequence    

Annotation

kegg
ID vvi:100254970
description probable disease resistance protein At5g63020
nr
ID KDP37037.1
description hypothetical protein JCGZ_06093 [Jatropha curcas]
swissprot
ID O22727
description Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana GN=At1g61190 PE=3 SV=1
trembl
ID A0A067KLL9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06093 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003086_010 0.0 - - hypothetical protein JCGZ_06093 [Jatropha curcas]
2 Hb_172426_050 0.1145586628 - - PREDICTED: uncharacterized protein LOC105634266 [Jatropha curcas]
3 Hb_000116_120 0.1479324701 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
4 Hb_000720_090 0.1666756584 transcription factor TF Family: MYB myb, putative [Ricinus communis]
5 Hb_021409_140 0.1703320781 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
6 Hb_078081_010 0.1716360566 - - hypothetical protein PRUPE_ppa015726mg [Prunus persica]
7 Hb_001405_150 0.1727488231 - - PREDICTED: protein At-4/1 [Jatropha curcas]
8 Hb_001252_070 0.1771243525 - - hypothetical protein JCGZ_01385 [Jatropha curcas]
9 Hb_002739_040 0.1801658543 - - PREDICTED: isocitrate dehydrogenase [NADP] [Jatropha curcas]
10 Hb_075497_010 0.1828619491 - - hypothetical protein JCGZ_18511 [Jatropha curcas]
11 Hb_010672_080 0.1834595127 transcription factor TF Family: MYB hypothetical protein JCGZ_00902 [Jatropha curcas]
12 Hb_000834_040 0.1836706807 - - PREDICTED: ras-related protein Rab7 [Cucumis melo]
13 Hb_001018_080 0.1844083027 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000186_290 0.1865910694 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 [Jatropha curcas]
15 Hb_003847_170 0.1870826761 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
16 Hb_000017_320 0.1876589447 transcription factor TF Family: bHLH PREDICTED: transcription factor GLABRA 3-like isoform X1 [Jatropha curcas]
17 Hb_000834_210 0.1885632255 - - unnamed protein product [Vitis vinifera]
18 Hb_001474_010 0.1907633322 - - PREDICTED: synaptotagmin-3 isoform X1 [Jatropha curcas]
19 Hb_001439_040 0.1909535504 - - PREDICTED: chorismate mutase 1, chloroplastic [Jatropha curcas]
20 Hb_002304_190 0.1934201093 - - PREDICTED: 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase [Jatropha curcas]

Gene co-expression network

sample Hb_003086_010 Hb_003086_010 Hb_172426_050 Hb_172426_050 Hb_003086_010--Hb_172426_050 Hb_000116_120 Hb_000116_120 Hb_003086_010--Hb_000116_120 Hb_000720_090 Hb_000720_090 Hb_003086_010--Hb_000720_090 Hb_021409_140 Hb_021409_140 Hb_003086_010--Hb_021409_140 Hb_078081_010 Hb_078081_010 Hb_003086_010--Hb_078081_010 Hb_001405_150 Hb_001405_150 Hb_003086_010--Hb_001405_150 Hb_000186_290 Hb_000186_290 Hb_172426_050--Hb_000186_290 Hb_001287_060 Hb_001287_060 Hb_172426_050--Hb_001287_060 Hb_004324_030 Hb_004324_030 Hb_172426_050--Hb_004324_030 Hb_172426_050--Hb_021409_140 Hb_002739_040 Hb_002739_040 Hb_172426_050--Hb_002739_040 Hb_000116_120--Hb_000186_290 Hb_000116_120--Hb_078081_010 Hb_000116_120--Hb_021409_140 Hb_000653_010 Hb_000653_010 Hb_000116_120--Hb_000653_010 Hb_001474_010 Hb_001474_010 Hb_000116_120--Hb_001474_010 Hb_000707_010 Hb_000707_010 Hb_000720_090--Hb_000707_010 Hb_000625_030 Hb_000625_030 Hb_000720_090--Hb_000625_030 Hb_008749_020 Hb_008749_020 Hb_000720_090--Hb_008749_020 Hb_000042_380 Hb_000042_380 Hb_000720_090--Hb_000042_380 Hb_002527_060 Hb_002527_060 Hb_000720_090--Hb_002527_060 Hb_008695_150 Hb_008695_150 Hb_000720_090--Hb_008695_150 Hb_021409_140--Hb_000186_290 Hb_021409_140--Hb_000707_010 Hb_021409_140--Hb_000720_090 Hb_078081_010--Hb_000186_290 Hb_078081_010--Hb_002739_040 Hb_001040_200 Hb_001040_200 Hb_078081_010--Hb_001040_200 Hb_000834_040 Hb_000834_040 Hb_078081_010--Hb_000834_040 Hb_002307_010 Hb_002307_010 Hb_078081_010--Hb_002307_010 Hb_001663_120 Hb_001663_120 Hb_078081_010--Hb_001663_120 Hb_000034_030 Hb_000034_030 Hb_001405_150--Hb_000034_030 Hb_001006_280 Hb_001006_280 Hb_001405_150--Hb_001006_280 Hb_002025_350 Hb_002025_350 Hb_001405_150--Hb_002025_350 Hb_001024_030 Hb_001024_030 Hb_001405_150--Hb_001024_030 Hb_001018_080 Hb_001018_080 Hb_001405_150--Hb_001018_080 Hb_000421_270 Hb_000421_270 Hb_001405_150--Hb_000421_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.64622 1.88648 2.29875 0.239124 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.28033 0.220376 0 4.25038 1.0879

CAGE analysis