Hb_172426_050

Information

Type -
Description -
Location Contig172426: 33434-34564
Sequence    

Annotation

kegg
ID rcu:RCOM_1288570
description hypothetical protein
nr
ID XP_012072493.1
description PREDICTED: uncharacterized protein LOC105634266 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1Q0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04672 PE=4 SV=1
Gene Ontology
ID GO:0016043
description myosin heavy chain-related family partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_172426_050 0.0 - - PREDICTED: uncharacterized protein LOC105634266 [Jatropha curcas]
2 Hb_003086_010 0.1145586628 - - hypothetical protein JCGZ_06093 [Jatropha curcas]
3 Hb_000186_290 0.1578164187 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 [Jatropha curcas]
4 Hb_001287_060 0.1583622582 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]
5 Hb_004324_030 0.1622562118 - - PREDICTED: probable protein phosphatase 2C 8 [Jatropha curcas]
6 Hb_021409_140 0.1719844319 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
7 Hb_002739_040 0.17198679 - - PREDICTED: isocitrate dehydrogenase [NADP] [Jatropha curcas]
8 Hb_078081_010 0.1740996294 - - hypothetical protein PRUPE_ppa015726mg [Prunus persica]
9 Hb_000216_050 0.1809468596 - - PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
10 Hb_000116_120 0.1843586123 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
11 Hb_075497_010 0.1879463961 - - hypothetical protein JCGZ_18511 [Jatropha curcas]
12 Hb_000834_040 0.1916350979 - - PREDICTED: ras-related protein Rab7 [Cucumis melo]
13 Hb_009545_030 0.1933867629 - - PREDICTED: folate-biopterin transporter 1, chloroplastic [Jatropha curcas]
14 Hb_164926_040 0.1964764313 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]
15 Hb_002835_350 0.1979859549 - - PREDICTED: uncharacterized protein LOC105640319 [Jatropha curcas]
16 Hb_001405_150 0.1999687691 - - PREDICTED: protein At-4/1 [Jatropha curcas]
17 Hb_001456_050 0.2023411657 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
18 Hb_042509_020 0.2044700749 - - hypothetical protein JCGZ_19555 [Jatropha curcas]
19 Hb_000005_230 0.209705087 - - hypothetical protein POPTR_0009s01160g [Populus trichocarpa]
20 Hb_008566_080 0.2098040409 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]

Gene co-expression network

sample Hb_172426_050 Hb_172426_050 Hb_003086_010 Hb_003086_010 Hb_172426_050--Hb_003086_010 Hb_000186_290 Hb_000186_290 Hb_172426_050--Hb_000186_290 Hb_001287_060 Hb_001287_060 Hb_172426_050--Hb_001287_060 Hb_004324_030 Hb_004324_030 Hb_172426_050--Hb_004324_030 Hb_021409_140 Hb_021409_140 Hb_172426_050--Hb_021409_140 Hb_002739_040 Hb_002739_040 Hb_172426_050--Hb_002739_040 Hb_000116_120 Hb_000116_120 Hb_003086_010--Hb_000116_120 Hb_000720_090 Hb_000720_090 Hb_003086_010--Hb_000720_090 Hb_003086_010--Hb_021409_140 Hb_078081_010 Hb_078081_010 Hb_003086_010--Hb_078081_010 Hb_001405_150 Hb_001405_150 Hb_003086_010--Hb_001405_150 Hb_000186_290--Hb_078081_010 Hb_000186_290--Hb_002739_040 Hb_164926_040 Hb_164926_040 Hb_000186_290--Hb_164926_040 Hb_000186_290--Hb_000116_120 Hb_004346_010 Hb_004346_010 Hb_000186_290--Hb_004346_010 Hb_000186_290--Hb_021409_140 Hb_000832_280 Hb_000832_280 Hb_001287_060--Hb_000832_280 Hb_000216_050 Hb_000216_050 Hb_001287_060--Hb_000216_050 Hb_001287_060--Hb_004324_030 Hb_000181_210 Hb_000181_210 Hb_001287_060--Hb_000181_210 Hb_001456_050 Hb_001456_050 Hb_001287_060--Hb_001456_050 Hb_001922_060 Hb_001922_060 Hb_001287_060--Hb_001922_060 Hb_004324_030--Hb_002739_040 Hb_042509_020 Hb_042509_020 Hb_004324_030--Hb_042509_020 Hb_026549_050 Hb_026549_050 Hb_004324_030--Hb_026549_050 Hb_000003_020 Hb_000003_020 Hb_004324_030--Hb_000003_020 Hb_004324_030--Hb_000181_210 Hb_004324_030--Hb_000216_050 Hb_021409_140--Hb_000116_120 Hb_000707_010 Hb_000707_010 Hb_021409_140--Hb_000707_010 Hb_021409_140--Hb_000720_090 Hb_002739_040--Hb_000003_020 Hb_003142_060 Hb_003142_060 Hb_002739_040--Hb_003142_060 Hb_004079_100 Hb_004079_100 Hb_002739_040--Hb_004079_100 Hb_002739_040--Hb_026549_050 Hb_000834_040 Hb_000834_040 Hb_002739_040--Hb_000834_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.150122 0.276078 0.612726 0.0237165 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.108371 0.0852287 0 0.840857 0.173664

CAGE analysis