Hb_000216_050

Information

Type -
Description -
Location Contig216: 108926-123483
Sequence    

Annotation

kegg
ID rcu:RCOM_0952150
description aldehyde oxidase, putative (EC:1.2.3.1)
nr
ID XP_012066305.1
description PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
swissprot
ID Q7G192
description Indole-3-acetaldehyde oxidase OS=Arabidopsis thaliana GN=AAO2 PE=1 SV=2
trembl
ID B9RQ25
description Aldehyde oxidase, putative OS=Ricinus communis GN=RCOM_0952150 PE=4 SV=1
Gene Ontology
ID GO:0004031
description indole-3-acetaldehyde oxidase-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22355: 52875-119383 , PASA_asmbl_22356: 120976-121222 , PASA_asmbl_22357: 123330-123576
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000216_050 0.0 - - PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
2 Hb_004324_030 0.1162072223 - - PREDICTED: probable protein phosphatase 2C 8 [Jatropha curcas]
3 Hb_001287_060 0.1265475582 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]
4 Hb_000002_360 0.1466846414 - - hypothetical protein POPTR_0008s16470g [Populus trichocarpa]
5 Hb_026549_050 0.1491326728 - - PREDICTED: uncharacterized protein LOC105636246 isoform X2 [Jatropha curcas]
6 Hb_002739_040 0.1501920086 - - PREDICTED: isocitrate dehydrogenase [NADP] [Jatropha curcas]
7 Hb_143766_080 0.1547236858 - - PREDICTED: uncharacterized protein LOC105637797 isoform X1 [Jatropha curcas]
8 Hb_000832_280 0.15730201 - - PREDICTED: aquaporin TIP1-3 [Jatropha curcas]
9 Hb_000181_210 0.1582584127 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
10 Hb_000567_180 0.1587239176 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.5 [Jatropha curcas]
11 Hb_000003_020 0.160186283 - - PREDICTED: uncharacterized protein LOC105631161 [Jatropha curcas]
12 Hb_001456_050 0.1619243936 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
13 Hb_001922_060 0.1622802167 - - ATP binding protein, putative [Ricinus communis]
14 Hb_000392_250 0.1689002381 - - PREDICTED: HVA22-like protein a [Jatropha curcas]
15 Hb_002200_070 0.1689966962 - - PREDICTED: endoglucanase 9-like [Populus euphratica]
16 Hb_002999_080 0.1696023086 transcription factor TF Family: G2-like PREDICTED: accessory gland protein Acp36DE [Jatropha curcas]
17 Hb_000175_470 0.1729943826 - - lactoylglutathione lyase, putative [Ricinus communis]
18 Hb_009545_030 0.1737470806 - - PREDICTED: folate-biopterin transporter 1, chloroplastic [Jatropha curcas]
19 Hb_080477_080 0.1741854852 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 isoform X1 [Gossypium raimondii]
20 Hb_008566_080 0.1753237127 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]

Gene co-expression network

sample Hb_000216_050 Hb_000216_050 Hb_004324_030 Hb_004324_030 Hb_000216_050--Hb_004324_030 Hb_001287_060 Hb_001287_060 Hb_000216_050--Hb_001287_060 Hb_000002_360 Hb_000002_360 Hb_000216_050--Hb_000002_360 Hb_026549_050 Hb_026549_050 Hb_000216_050--Hb_026549_050 Hb_002739_040 Hb_002739_040 Hb_000216_050--Hb_002739_040 Hb_143766_080 Hb_143766_080 Hb_000216_050--Hb_143766_080 Hb_004324_030--Hb_002739_040 Hb_042509_020 Hb_042509_020 Hb_004324_030--Hb_042509_020 Hb_004324_030--Hb_026549_050 Hb_000003_020 Hb_000003_020 Hb_004324_030--Hb_000003_020 Hb_000181_210 Hb_000181_210 Hb_004324_030--Hb_000181_210 Hb_000832_280 Hb_000832_280 Hb_001287_060--Hb_000832_280 Hb_001287_060--Hb_004324_030 Hb_001287_060--Hb_000181_210 Hb_001456_050 Hb_001456_050 Hb_001287_060--Hb_001456_050 Hb_001922_060 Hb_001922_060 Hb_001287_060--Hb_001922_060 Hb_000002_360--Hb_026549_050 Hb_000002_360--Hb_000832_280 Hb_000866_320 Hb_000866_320 Hb_000002_360--Hb_000866_320 Hb_001433_160 Hb_001433_160 Hb_000002_360--Hb_001433_160 Hb_003387_050 Hb_003387_050 Hb_000002_360--Hb_003387_050 Hb_000002_360--Hb_001922_060 Hb_026549_050--Hb_000181_210 Hb_026549_050--Hb_001922_060 Hb_026549_050--Hb_000003_020 Hb_026549_050--Hb_000832_280 Hb_002739_040--Hb_000003_020 Hb_003142_060 Hb_003142_060 Hb_002739_040--Hb_003142_060 Hb_004079_100 Hb_004079_100 Hb_002739_040--Hb_004079_100 Hb_002739_040--Hb_026549_050 Hb_000834_040 Hb_000834_040 Hb_002739_040--Hb_000834_040 Hb_001754_050 Hb_001754_050 Hb_143766_080--Hb_001754_050 Hb_003710_020 Hb_003710_020 Hb_143766_080--Hb_003710_020 Hb_004129_010 Hb_004129_010 Hb_143766_080--Hb_004129_010 Hb_004522_030 Hb_004522_030 Hb_143766_080--Hb_004522_030 Hb_000116_240 Hb_000116_240 Hb_143766_080--Hb_000116_240 Hb_004883_020 Hb_004883_020 Hb_143766_080--Hb_004883_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00850759 0.56643 0.741192 1.61863 0.00397996 0.0268635
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.279356 0.272916 0.0291581 1.13148 0.569414

CAGE analysis