Hb_134911_010

Information

Type -
Description -
Location Contig134911: 438-7410
Sequence    

Annotation

kegg
ID rcu:RCOM_1099830
description hypothetical protein
nr
ID XP_002532131.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T1L2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1099830 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_134911_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000707_010 0.1378673467 - - hypothetical protein JCGZ_25098 [Jatropha curcas]
3 Hb_117639_010 0.1708721484 - - hypothetical protein B456_013G070100 [Gossypium raimondii]
4 Hb_000077_400 0.1818395281 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
5 Hb_001439_040 0.2027105053 - - PREDICTED: chorismate mutase 1, chloroplastic [Jatropha curcas]
6 Hb_000057_100 0.2027808457 - - Peroxidase 57 precursor, putative [Ricinus communis]
7 Hb_000720_090 0.2051483287 transcription factor TF Family: MYB myb, putative [Ricinus communis]
8 Hb_002186_070 0.2079523023 - - kinase, putative [Ricinus communis]
9 Hb_007134_030 0.2110390634 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
10 Hb_000042_380 0.2130364633 - - PREDICTED: uncharacterized membrane protein At3g27390 [Jatropha curcas]
11 Hb_001439_010 0.2155272888 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Jatropha curcas]
12 Hb_021409_140 0.2164978927 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
13 Hb_006775_110 0.216549618 - - PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
14 Hb_022250_160 0.2189657163 - - respiratory burst oxidase A [Manihot esculenta]
15 Hb_003879_020 0.2192610361 - - PREDICTED: MATE efflux family protein 1-like [Jatropha curcas]
16 Hb_008143_040 0.2192704622 - - Alpha-expansin 4 precursor, putative [Ricinus communis]
17 Hb_001916_030 0.2197244675 - - PREDICTED: uncharacterized protein LOC105802975 [Gossypium raimondii]
18 Hb_000753_180 0.2202599056 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
19 Hb_005467_010 0.220620974 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
20 Hb_006469_090 0.220735366 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]

Gene co-expression network

sample Hb_134911_010 Hb_134911_010 Hb_000707_010 Hb_000707_010 Hb_134911_010--Hb_000707_010 Hb_117639_010 Hb_117639_010 Hb_134911_010--Hb_117639_010 Hb_000077_400 Hb_000077_400 Hb_134911_010--Hb_000077_400 Hb_001439_040 Hb_001439_040 Hb_134911_010--Hb_001439_040 Hb_000057_100 Hb_000057_100 Hb_134911_010--Hb_000057_100 Hb_000720_090 Hb_000720_090 Hb_134911_010--Hb_000720_090 Hb_000707_010--Hb_000720_090 Hb_000707_010--Hb_000077_400 Hb_021409_140 Hb_021409_140 Hb_000707_010--Hb_021409_140 Hb_000042_380 Hb_000042_380 Hb_000707_010--Hb_000042_380 Hb_000707_010--Hb_001439_040 Hb_117639_010--Hb_000057_100 Hb_007875_020 Hb_007875_020 Hb_117639_010--Hb_007875_020 Hb_000337_030 Hb_000337_030 Hb_117639_010--Hb_000337_030 Hb_022250_160 Hb_022250_160 Hb_117639_010--Hb_022250_160 Hb_008143_040 Hb_008143_040 Hb_117639_010--Hb_008143_040 Hb_005663_090 Hb_005663_090 Hb_117639_010--Hb_005663_090 Hb_003879_020 Hb_003879_020 Hb_000077_400--Hb_003879_020 Hb_001439_010 Hb_001439_010 Hb_000077_400--Hb_001439_010 Hb_006469_090 Hb_006469_090 Hb_000077_400--Hb_006469_090 Hb_001675_270 Hb_001675_270 Hb_000077_400--Hb_001675_270 Hb_005568_050 Hb_005568_050 Hb_000077_400--Hb_005568_050 Hb_003607_140 Hb_003607_140 Hb_000077_400--Hb_003607_140 Hb_001832_110 Hb_001832_110 Hb_001439_040--Hb_001832_110 Hb_001226_100 Hb_001226_100 Hb_001439_040--Hb_001226_100 Hb_002304_190 Hb_002304_190 Hb_001439_040--Hb_002304_190 Hb_000336_280 Hb_000336_280 Hb_001439_040--Hb_000336_280 Hb_002685_100 Hb_002685_100 Hb_001439_040--Hb_002685_100 Hb_000215_130 Hb_000215_130 Hb_001439_040--Hb_000215_130 Hb_000946_070 Hb_000946_070 Hb_000057_100--Hb_000946_070 Hb_001488_350 Hb_001488_350 Hb_000057_100--Hb_001488_350 Hb_000057_100--Hb_008143_040 Hb_000181_220 Hb_000181_220 Hb_000057_100--Hb_000181_220 Hb_143766_070 Hb_143766_070 Hb_000057_100--Hb_143766_070 Hb_000625_030 Hb_000625_030 Hb_000720_090--Hb_000625_030 Hb_008749_020 Hb_008749_020 Hb_000720_090--Hb_008749_020 Hb_000720_090--Hb_000042_380 Hb_002527_060 Hb_002527_060 Hb_000720_090--Hb_002527_060 Hb_008695_150 Hb_008695_150 Hb_000720_090--Hb_008695_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0869206 0.299645 0.300402 0 0.0406874
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.116983 0 0.522249 0.349549

CAGE analysis