Hb_000094_370

Information

Type -
Description -
Location Contig94: 309104-312979
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_370 0.0 - - -
2 Hb_000684_360 0.1159332729 transcription factor TF Family: AP2 hypothetical protein JCGZ_16454 [Jatropha curcas]
3 Hb_012325_010 0.1373393867 - - hypothetical protein RCOM_0068670 [Ricinus communis]
4 Hb_025336_020 0.139453276 - - PREDICTED: PP2A regulatory subunit TAP46 [Jatropha curcas]
5 Hb_003626_040 0.1426789844 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X2 [Jatropha curcas]
6 Hb_001500_070 0.142814941 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001019_050 0.1443516174 - - PREDICTED: importin-13 [Jatropha curcas]
8 Hb_000081_120 0.146238848 - - H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]
9 Hb_000159_120 0.1472532456 - - PREDICTED: uncharacterized protein LOC105632857 [Jatropha curcas]
10 Hb_000227_330 0.1473942847 - - Acyl-CoA synthetase [Ricinus communis]
11 Hb_053575_020 0.1480320902 - - PREDICTED: RNA-binding protein 39 [Jatropha curcas]
12 Hb_009732_020 0.1480830864 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
13 Hb_003813_120 0.1482958318 - - zinc finger protein, putative [Ricinus communis]
14 Hb_001780_150 0.1496717612 - - ceramidase, putative [Ricinus communis]
15 Hb_002213_090 0.1521215706 - - PREDICTED: uncharacterized protein LOC105640147 [Jatropha curcas]
16 Hb_002539_020 0.153026137 - - hypothetical protein CISIN_1g007216mg [Citrus sinensis]
17 Hb_011287_010 0.1540963064 - - ubiquitin-protein ligase, putative [Ricinus communis]
18 Hb_001726_110 0.1541182211 transcription factor TF Family: Orphans PREDICTED: B-box zinc finger protein 19 [Jatropha curcas]
19 Hb_003906_170 0.1542941209 - - alcohol dehydrogenase, putative [Ricinus communis]
20 Hb_000227_040 0.1544475698 - - Stem-specific protein TSJT1, putative [Ricinus communis]

Gene co-expression network

sample Hb_000094_370 Hb_000094_370 Hb_000684_360 Hb_000684_360 Hb_000094_370--Hb_000684_360 Hb_012325_010 Hb_012325_010 Hb_000094_370--Hb_012325_010 Hb_025336_020 Hb_025336_020 Hb_000094_370--Hb_025336_020 Hb_003626_040 Hb_003626_040 Hb_000094_370--Hb_003626_040 Hb_001500_070 Hb_001500_070 Hb_000094_370--Hb_001500_070 Hb_001019_050 Hb_001019_050 Hb_000094_370--Hb_001019_050 Hb_003125_180 Hb_003125_180 Hb_000684_360--Hb_003125_180 Hb_053575_020 Hb_053575_020 Hb_000684_360--Hb_053575_020 Hb_169051_010 Hb_169051_010 Hb_000684_360--Hb_169051_010 Hb_000157_070 Hb_000157_070 Hb_000684_360--Hb_000157_070 Hb_000702_060 Hb_000702_060 Hb_000684_360--Hb_000702_060 Hb_029879_120 Hb_029879_120 Hb_000684_360--Hb_029879_120 Hb_006916_110 Hb_006916_110 Hb_012325_010--Hb_006916_110 Hb_000227_330 Hb_000227_330 Hb_012325_010--Hb_000227_330 Hb_000342_050 Hb_000342_050 Hb_012325_010--Hb_000342_050 Hb_000125_180 Hb_000125_180 Hb_012325_010--Hb_000125_180 Hb_012325_010--Hb_000157_070 Hb_020805_180 Hb_020805_180 Hb_012325_010--Hb_020805_180 Hb_000088_270 Hb_000088_270 Hb_025336_020--Hb_000088_270 Hb_007423_050 Hb_007423_050 Hb_025336_020--Hb_007423_050 Hb_012022_080 Hb_012022_080 Hb_025336_020--Hb_012022_080 Hb_025336_020--Hb_001019_050 Hb_000008_420 Hb_000008_420 Hb_025336_020--Hb_000008_420 Hb_005489_140 Hb_005489_140 Hb_025336_020--Hb_005489_140 Hb_000347_110 Hb_000347_110 Hb_003626_040--Hb_000347_110 Hb_006717_070 Hb_006717_070 Hb_003626_040--Hb_006717_070 Hb_003626_040--Hb_000702_060 Hb_003813_120 Hb_003813_120 Hb_003626_040--Hb_003813_120 Hb_003626_040--Hb_000684_360 Hb_003626_040--Hb_001500_070 Hb_003626_050 Hb_003626_050 Hb_001500_070--Hb_003626_050 Hb_004041_100 Hb_004041_100 Hb_001500_070--Hb_004041_100 Hb_002213_090 Hb_002213_090 Hb_001500_070--Hb_002213_090 Hb_000625_030 Hb_000625_030 Hb_001500_070--Hb_000625_030 Hb_001500_070--Hb_000347_110 Hb_001500_070--Hb_012325_010 Hb_001019_050--Hb_000088_270 Hb_000347_450 Hb_000347_450 Hb_001019_050--Hb_000347_450 Hb_000159_120 Hb_000159_120 Hb_001019_050--Hb_000159_120 Hb_107298_010 Hb_107298_010 Hb_001019_050--Hb_107298_010 Hb_001019_050--Hb_005489_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.471833 1.33982 0.430364 1.37598 0.408402 0.449604
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.733005 0.764592 0.230302 3.40296 1.36962

CAGE analysis