Hb_007423_050

Information

Type -
Description -
Location Contig7423: 59561-74236
Sequence    

Annotation

kegg
ID rcu:RCOM_0765200
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.25)
nr
ID XP_012083922.1
description PREDICTED: cysteine-rich receptor-like protein kinase 3 [Jatropha curcas]
swissprot
ID Q9CAL3
description Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1
trembl
ID B9SJM8
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0765200 PE=3 SV=1
Gene Ontology
ID GO:0005622
description cysteine-rich receptor-like protein kinase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56525: 69647-69897
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007423_050 0.0 - - PREDICTED: cysteine-rich receptor-like protein kinase 3 [Jatropha curcas]
2 Hb_025336_020 0.0787473896 - - PREDICTED: PP2A regulatory subunit TAP46 [Jatropha curcas]
3 Hb_000008_420 0.0788279761 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
4 Hb_011671_270 0.0911008025 - - phosphofructokinase [Hevea brasiliensis]
5 Hb_006637_070 0.1010029842 - - PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Jatropha curcas]
6 Hb_000690_150 0.1021385833 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
7 Hb_000088_270 0.1040515686 - - PREDICTED: uncharacterized protein LOC105637003 [Jatropha curcas]
8 Hb_007257_060 0.1065956471 - - PREDICTED: omega-amidase,chloroplastic [Jatropha curcas]
9 Hb_000347_450 0.1109462334 - - PREDICTED: tRNA(His) guanylyltransferase 1-like isoform X2 [Jatropha curcas]
10 Hb_011224_160 0.1112196734 transcription factor, rubber biosynthesis TF Family: HSF, Gene Name: Farnesyl diphosphate synthase PREDICTED: heat stress transcription factor A-5 [Jatropha curcas]
11 Hb_000920_300 0.1113332374 - - PREDICTED: flowering time control protein FY isoform X2 [Jatropha curcas]
12 Hb_006501_160 0.1126508192 - - PREDICTED: hexokinase-1-like [Jatropha curcas]
13 Hb_028960_030 0.1130108429 - - Short-chain dehydrogenase-reductase B [Theobroma cacao]
14 Hb_001301_150 0.1148292449 - - PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera]
15 Hb_001892_030 0.1148815295 - - PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Jatropha curcas]
16 Hb_000555_100 0.1154967589 - - hypothetical protein JCGZ_14689 [Jatropha curcas]
17 Hb_000510_340 0.1163506309 transcription factor TF Family: bZIP PREDICTED: light-inducible protein CPRF2 [Jatropha curcas]
18 Hb_000565_040 0.1182049483 - - RecName: Full=Superoxide dismutase [Mn], mitochondrial; Flags: Precursor [Hevea brasiliensis]
19 Hb_000167_010 0.1197824006 - - conserved hypothetical protein [Ricinus communis]
20 Hb_012092_050 0.1207100484 - - PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007423_050 Hb_007423_050 Hb_025336_020 Hb_025336_020 Hb_007423_050--Hb_025336_020 Hb_000008_420 Hb_000008_420 Hb_007423_050--Hb_000008_420 Hb_011671_270 Hb_011671_270 Hb_007423_050--Hb_011671_270 Hb_006637_070 Hb_006637_070 Hb_007423_050--Hb_006637_070 Hb_000690_150 Hb_000690_150 Hb_007423_050--Hb_000690_150 Hb_000088_270 Hb_000088_270 Hb_007423_050--Hb_000088_270 Hb_025336_020--Hb_000088_270 Hb_012022_080 Hb_012022_080 Hb_025336_020--Hb_012022_080 Hb_001019_050 Hb_001019_050 Hb_025336_020--Hb_001019_050 Hb_025336_020--Hb_000008_420 Hb_005489_140 Hb_005489_140 Hb_025336_020--Hb_005489_140 Hb_000008_420--Hb_000088_270 Hb_006588_060 Hb_006588_060 Hb_000008_420--Hb_006588_060 Hb_012092_050 Hb_012092_050 Hb_000008_420--Hb_012092_050 Hb_007257_060 Hb_007257_060 Hb_000008_420--Hb_007257_060 Hb_000920_300 Hb_000920_300 Hb_000008_420--Hb_000920_300 Hb_000565_040 Hb_000565_040 Hb_011671_270--Hb_000565_040 Hb_000510_340 Hb_000510_340 Hb_011671_270--Hb_000510_340 Hb_028960_030 Hb_028960_030 Hb_011671_270--Hb_028960_030 Hb_003528_050 Hb_003528_050 Hb_011671_270--Hb_003528_050 Hb_000352_310 Hb_000352_310 Hb_011671_270--Hb_000352_310 Hb_011224_160 Hb_011224_160 Hb_011671_270--Hb_011224_160 Hb_003994_120 Hb_003994_120 Hb_006637_070--Hb_003994_120 Hb_001489_090 Hb_001489_090 Hb_006637_070--Hb_001489_090 Hb_003465_030 Hb_003465_030 Hb_006637_070--Hb_003465_030 Hb_006570_080 Hb_006570_080 Hb_006637_070--Hb_006570_080 Hb_023001_040 Hb_023001_040 Hb_006637_070--Hb_023001_040 Hb_000796_240 Hb_000796_240 Hb_000690_150--Hb_000796_240 Hb_000690_150--Hb_000008_420 Hb_000690_150--Hb_011671_270 Hb_000690_150--Hb_028960_030 Hb_005215_020 Hb_005215_020 Hb_000690_150--Hb_005215_020 Hb_000088_270--Hb_001019_050 Hb_000088_270--Hb_011224_160 Hb_000347_450 Hb_000347_450 Hb_000088_270--Hb_000347_450 Hb_003777_290 Hb_003777_290 Hb_000088_270--Hb_003777_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.300647 0.370694 0.286909 0.349982 0.19108 0.124596
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.3695 0.317218 0.118417 0.575939 0.320869

CAGE analysis