Hb_074506_010

Information

Type -
Description -
Location Contig74506: 122-457
Sequence    

Annotation

kegg
ID rcu:RCOM_0897890
description hypothetical protein
nr
ID BAJ53247.1
description JHL25H03.10 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUD7
description JHL25H03.10 protein OS=Jatropha curcas GN=JHL25H03.10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074506_010 0.0 - - JHL25H03.10 [Jatropha curcas]
2 Hb_004657_060 0.1168241445 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
3 Hb_000853_060 0.1800224939 - - PREDICTED: myelin transcription factor 1-like isoform X1 [Jatropha curcas]
4 Hb_000453_240 0.1862845017 rubber biosynthesis Gene Name: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [Hevea brasiliensis]
5 Hb_152868_030 0.1869388603 - - abhydrolase domain containing, putative [Ricinus communis]
6 Hb_011633_040 0.1928684174 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 [Jatropha curcas]
7 Hb_101449_010 0.1972400363 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
8 Hb_027760_090 0.2000726129 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
9 Hb_000735_070 0.2036999219 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
10 Hb_006700_040 0.2079490371 - - PREDICTED: vacuolar-sorting receptor 6-like [Jatropha curcas]
11 Hb_000061_090 0.2099317625 - - hypothetical protein B456_003G0981001, partial [Gossypium raimondii]
12 Hb_006846_120 0.2102171866 - - Succinate/fumarate mitochondrial transporter, putative [Ricinus communis]
13 Hb_028872_150 0.2104912603 - - PREDICTED: uncharacterized protein LOC105137493 [Populus euphratica]
14 Hb_002660_120 0.2116264373 - - PREDICTED: putative serine/threonine-protein kinase [Populus euphratica]
15 Hb_007423_020 0.2123633183 - - 2-nitropropane dioxygenase precursor, putative [Ricinus communis]
16 Hb_002539_010 0.2143608892 - - hypothetical protein JCGZ_15711 [Jatropha curcas]
17 Hb_002527_050 0.216206678 - - hypothetical protein JCGZ_20265 [Jatropha curcas]
18 Hb_011872_020 0.2189591679 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH128 [Jatropha curcas]
19 Hb_002539_020 0.2196982956 - - hypothetical protein CISIN_1g007216mg [Citrus sinensis]
20 Hb_012565_040 0.2225133074 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]

Gene co-expression network

sample Hb_074506_010 Hb_074506_010 Hb_004657_060 Hb_004657_060 Hb_074506_010--Hb_004657_060 Hb_000853_060 Hb_000853_060 Hb_074506_010--Hb_000853_060 Hb_000453_240 Hb_000453_240 Hb_074506_010--Hb_000453_240 Hb_152868_030 Hb_152868_030 Hb_074506_010--Hb_152868_030 Hb_011633_040 Hb_011633_040 Hb_074506_010--Hb_011633_040 Hb_101449_010 Hb_101449_010 Hb_074506_010--Hb_101449_010 Hb_004657_060--Hb_152868_030 Hb_006700_040 Hb_006700_040 Hb_004657_060--Hb_006700_040 Hb_027760_090 Hb_027760_090 Hb_004657_060--Hb_027760_090 Hb_012760_110 Hb_012760_110 Hb_004657_060--Hb_012760_110 Hb_002291_020 Hb_002291_020 Hb_004657_060--Hb_002291_020 Hb_000165_210 Hb_000165_210 Hb_000853_060--Hb_000165_210 Hb_007919_040 Hb_007919_040 Hb_000853_060--Hb_007919_040 Hb_003120_040 Hb_003120_040 Hb_000853_060--Hb_003120_040 Hb_006573_300 Hb_006573_300 Hb_000853_060--Hb_006573_300 Hb_001114_070 Hb_001114_070 Hb_000853_060--Hb_001114_070 Hb_029584_090 Hb_029584_090 Hb_000853_060--Hb_029584_090 Hb_028872_150 Hb_028872_150 Hb_000453_240--Hb_028872_150 Hb_001040_150 Hb_001040_150 Hb_000453_240--Hb_001040_150 Hb_000574_250 Hb_000574_250 Hb_000453_240--Hb_000574_250 Hb_001123_010 Hb_001123_010 Hb_000453_240--Hb_001123_010 Hb_000453_240--Hb_152868_030 Hb_000453_240--Hb_006700_040 Hb_027380_190 Hb_027380_190 Hb_152868_030--Hb_027380_190 Hb_005015_110 Hb_005015_110 Hb_152868_030--Hb_005015_110 Hb_002170_020 Hb_002170_020 Hb_152868_030--Hb_002170_020 Hb_003025_030 Hb_003025_030 Hb_152868_030--Hb_003025_030 Hb_000465_150 Hb_000465_150 Hb_152868_030--Hb_000465_150 Hb_152868_030--Hb_011633_040 Hb_002539_010 Hb_002539_010 Hb_011633_040--Hb_002539_010 Hb_029921_030 Hb_029921_030 Hb_011633_040--Hb_029921_030 Hb_011633_040--Hb_027380_190 Hb_012545_090 Hb_012545_090 Hb_011633_040--Hb_012545_090 Hb_001140_360 Hb_001140_360 Hb_011633_040--Hb_001140_360 Hb_033594_100 Hb_033594_100 Hb_101449_010--Hb_033594_100 Hb_000009_440 Hb_000009_440 Hb_101449_010--Hb_000009_440 Hb_001268_300 Hb_001268_300 Hb_101449_010--Hb_001268_300 Hb_082683_010 Hb_082683_010 Hb_101449_010--Hb_082683_010 Hb_011853_010 Hb_011853_010 Hb_101449_010--Hb_011853_010 Hb_101449_010--Hb_152868_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.63904 5.87558 2.16779 4.57917 0 0.334179
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.42973 5.62029 2.69948 18.2097 8.84158

CAGE analysis