Hb_000165_210

Information

Type -
Description -
Location Contig165: 183668-185164
Sequence    

Annotation

kegg
ID rcu:RCOM_0839570
description transcription factor, putative
nr
ID XP_012087029.1
description PREDICTED: trihelix transcription factor ASIL2 isoform X2 [Jatropha curcas]
swissprot
ID Q9LJG8
description Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana GN=ASIL2 PE=2 SV=1
trembl
ID A0A067LJD4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01230 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15206: 184694-184833
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000165_210 0.0 - - PREDICTED: trihelix transcription factor ASIL2 isoform X2 [Jatropha curcas]
2 Hb_000853_060 0.1396267752 - - PREDICTED: myelin transcription factor 1-like isoform X1 [Jatropha curcas]
3 Hb_000120_390 0.1570060247 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
4 Hb_000414_110 0.1614764891 - - PREDICTED: MATE efflux family protein 5 isoform X1 [Populus euphratica]
5 Hb_001206_090 0.1656291413 - - pyruvate decarboxylase [Hevea brasiliensis]
6 Hb_002304_140 0.1681277542 - - ring finger protein, putative [Ricinus communis]
7 Hb_000879_190 0.173101314 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000645_210 0.1854229655 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X2 [Jatropha curcas]
9 Hb_000417_320 0.1929245274 - - hypothetical protein CICLE_v10000333mg [Citrus clementina]
10 Hb_007919_040 0.1938313775 - - PREDICTED: protein LYK5 [Jatropha curcas]
11 Hb_003845_020 0.1943256384 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_006453_010 0.1964635321 - - PREDICTED: glutaredoxin-C9 [Jatropha curcas]
13 Hb_006573_300 0.1976170234 - - ATP binding protein, putative [Ricinus communis]
14 Hb_000098_310 0.1998641863 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
15 Hb_011200_020 0.1998972631 - - aldo-keto reductase, putative [Ricinus communis]
16 Hb_032225_040 0.2013415157 - - -
17 Hb_001114_070 0.2015878198 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g58400 [Jatropha curcas]
18 Hb_000300_130 0.2024218394 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105141503 [Populus euphratica]
19 Hb_181110_010 0.2060926894 - - auxin:hydrogen symporter, putative [Ricinus communis]
20 Hb_000928_040 0.2079153392 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_000165_210 Hb_000165_210 Hb_000853_060 Hb_000853_060 Hb_000165_210--Hb_000853_060 Hb_000120_390 Hb_000120_390 Hb_000165_210--Hb_000120_390 Hb_000414_110 Hb_000414_110 Hb_000165_210--Hb_000414_110 Hb_001206_090 Hb_001206_090 Hb_000165_210--Hb_001206_090 Hb_002304_140 Hb_002304_140 Hb_000165_210--Hb_002304_140 Hb_000879_190 Hb_000879_190 Hb_000165_210--Hb_000879_190 Hb_007919_040 Hb_007919_040 Hb_000853_060--Hb_007919_040 Hb_003120_040 Hb_003120_040 Hb_000853_060--Hb_003120_040 Hb_006573_300 Hb_006573_300 Hb_000853_060--Hb_006573_300 Hb_001114_070 Hb_001114_070 Hb_000853_060--Hb_001114_070 Hb_029584_090 Hb_029584_090 Hb_000853_060--Hb_029584_090 Hb_000318_200 Hb_000318_200 Hb_000120_390--Hb_000318_200 Hb_000417_320 Hb_000417_320 Hb_000120_390--Hb_000417_320 Hb_000120_390--Hb_000414_110 Hb_181110_010 Hb_181110_010 Hb_000120_390--Hb_181110_010 Hb_003226_120 Hb_003226_120 Hb_000120_390--Hb_003226_120 Hb_000414_110--Hb_000417_320 Hb_028811_010 Hb_028811_010 Hb_000414_110--Hb_028811_010 Hb_000808_170 Hb_000808_170 Hb_000414_110--Hb_000808_170 Hb_000061_090 Hb_000061_090 Hb_000414_110--Hb_000061_090 Hb_002291_010 Hb_002291_010 Hb_000414_110--Hb_002291_010 Hb_000645_210 Hb_000645_210 Hb_001206_090--Hb_000645_210 Hb_127886_010 Hb_127886_010 Hb_001206_090--Hb_127886_010 Hb_000098_310 Hb_000098_310 Hb_001206_090--Hb_000098_310 Hb_000928_040 Hb_000928_040 Hb_001206_090--Hb_000928_040 Hb_004195_110 Hb_004195_110 Hb_001206_090--Hb_004195_110 Hb_001248_030 Hb_001248_030 Hb_002304_140--Hb_001248_030 Hb_007416_150 Hb_007416_150 Hb_002304_140--Hb_007416_150 Hb_002304_140--Hb_004195_110 Hb_009823_010 Hb_009823_010 Hb_002304_140--Hb_009823_010 Hb_002304_140--Hb_000098_310 Hb_000879_190--Hb_000061_090 Hb_000879_190--Hb_000414_110 Hb_004800_170 Hb_004800_170 Hb_000879_190--Hb_004800_170 Hb_158092_060 Hb_158092_060 Hb_000879_190--Hb_158092_060 Hb_001699_200 Hb_001699_200 Hb_000879_190--Hb_001699_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.464165 2.99705 0.796315 1.41501 0.120083 0.198495
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.98271 1.33669 1.02888 10.4383 1.14391

CAGE analysis