Hb_004800_170

Information

Type -
Description -
Location Contig4800: 134798-138904
Sequence    

Annotation

kegg
ID rcu:RCOM_0536900
description cytochrome P450, putative (EC:1.14.13.76)
nr
ID XP_012073892.1
description PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
swissprot
ID O64989
description Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CYP90B1 PE=1 SV=2
trembl
ID B9S6I4
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0536900 PE=3 SV=1
Gene Ontology
ID GO:0005783
description cytochrome p450 90b1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44697: 134665-134988 , PASA_asmbl_44698: 135077-135974
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004800_170 0.0 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
2 Hb_002918_230 0.1858481514 - - PREDICTED: probable glutathione S-transferase [Gossypium raimondii]
3 Hb_000975_150 0.1888978561 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8 isoform X1 [Jatropha curcas]
4 Hb_000879_190 0.202547822 - - conserved hypothetical protein [Ricinus communis]
5 Hb_024621_030 0.2113457397 - - tetraketide alpha-pyrone reductase 2 [Jatropha curcas]
6 Hb_002006_140 0.2142750346 transcription factor TF Family: ERF hypothetical protein POPTR_0012s11030g [Populus trichocarpa]
7 Hb_000056_330 0.2151056379 - - unnamed protein product [Vitis vinifera]
8 Hb_046994_010 0.2272686823 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
9 Hb_000025_430 0.2410308482 transcription factor TF Family: SRS transcription factor, putative [Ricinus communis]
10 Hb_000699_170 0.2410707122 - - myosin XI, putative [Ricinus communis]
11 Hb_003096_050 0.2430016218 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001355_130 0.2511471133 - - PREDICTED: uncharacterized protein LOC105137896 [Populus euphratica]
13 Hb_004976_050 0.2528662782 - - -
14 Hb_007894_250 0.2530447557 - - hypothetical protein JCGZ_06575 [Jatropha curcas]
15 Hb_002233_040 0.2541280336 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
16 Hb_000165_210 0.2568708514 - - PREDICTED: trihelix transcription factor ASIL2 isoform X2 [Jatropha curcas]
17 Hb_158092_060 0.2572824737 - - aspartate semialdehyde dehydrogenase, putative [Ricinus communis]
18 Hb_000061_090 0.2589780419 - - hypothetical protein B456_003G0981001, partial [Gossypium raimondii]
19 Hb_107201_010 0.2600918041 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
20 Hb_005389_190 0.2630078356 - - glutamate receptor 2 plant, putative [Ricinus communis]

Gene co-expression network

sample Hb_004800_170 Hb_004800_170 Hb_002918_230 Hb_002918_230 Hb_004800_170--Hb_002918_230 Hb_000975_150 Hb_000975_150 Hb_004800_170--Hb_000975_150 Hb_000879_190 Hb_000879_190 Hb_004800_170--Hb_000879_190 Hb_024621_030 Hb_024621_030 Hb_004800_170--Hb_024621_030 Hb_002006_140 Hb_002006_140 Hb_004800_170--Hb_002006_140 Hb_000056_330 Hb_000056_330 Hb_004800_170--Hb_000056_330 Hb_001355_130 Hb_001355_130 Hb_002918_230--Hb_001355_130 Hb_003096_050 Hb_003096_050 Hb_002918_230--Hb_003096_050 Hb_002918_230--Hb_000056_330 Hb_001190_060 Hb_001190_060 Hb_002918_230--Hb_001190_060 Hb_002918_230--Hb_000975_150 Hb_000975_150--Hb_003096_050 Hb_007894_250 Hb_007894_250 Hb_000975_150--Hb_007894_250 Hb_000975_150--Hb_000056_330 Hb_000390_260 Hb_000390_260 Hb_000975_150--Hb_000390_260 Hb_000975_150--Hb_001190_060 Hb_000165_210 Hb_000165_210 Hb_000879_190--Hb_000165_210 Hb_000061_090 Hb_000061_090 Hb_000879_190--Hb_000061_090 Hb_000414_110 Hb_000414_110 Hb_000879_190--Hb_000414_110 Hb_158092_060 Hb_158092_060 Hb_000879_190--Hb_158092_060 Hb_001699_200 Hb_001699_200 Hb_000879_190--Hb_001699_200 Hb_024621_030--Hb_000390_260 Hb_000699_170 Hb_000699_170 Hb_024621_030--Hb_000699_170 Hb_001045_050 Hb_001045_050 Hb_024621_030--Hb_001045_050 Hb_024621_030--Hb_000975_150 Hb_003435_060 Hb_003435_060 Hb_024621_030--Hb_003435_060 Hb_003428_100 Hb_003428_100 Hb_002006_140--Hb_003428_100 Hb_112082_030 Hb_112082_030 Hb_002006_140--Hb_112082_030 Hb_001250_140 Hb_001250_140 Hb_002006_140--Hb_001250_140 Hb_002006_140--Hb_001045_050 Hb_002311_240 Hb_002311_240 Hb_002006_140--Hb_002311_240 Hb_005389_190 Hb_005389_190 Hb_002006_140--Hb_005389_190 Hb_000926_130 Hb_000926_130 Hb_000056_330--Hb_000926_130 Hb_000056_330--Hb_007894_250 Hb_000056_330--Hb_003096_050 Hb_000056_330--Hb_001190_060 Hb_007072_020 Hb_007072_020 Hb_000056_330--Hb_007072_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.467933 0.456368 0.103453 0 0.0391652
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.28706 0.798446 0.884228 7.52155 0.328407

CAGE analysis