Hb_001250_140

Information

Type -
Description -
Location Contig1250: 155528-159702
Sequence    

Annotation

kegg
ID pop:POPTR_0010s05360g
description kinase family protein
nr
ID XP_012085437.1
description PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
swissprot
ID Q9CAL3
description Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1
trembl
ID A0A067K301
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17783 PE=3 SV=1
Gene Ontology
ID GO:0005886
description cysteine-rich receptor-like protein kinase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001250_140 0.0 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
2 Hb_058620_010 0.1084870439 - - cytochrome P450, putative [Ricinus communis]
3 Hb_002311_240 0.1190749442 - - hypothetical protein JCGZ_18937 [Jatropha curcas]
4 Hb_000352_080 0.1211986307 - - PREDICTED: lipid transfer-like protein VAS [Jatropha curcas]
5 Hb_012506_080 0.1249959361 - - amino acid transporter, putative [Ricinus communis]
6 Hb_135392_010 0.1262040551 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
7 Hb_001134_040 0.1282220379 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
8 Hb_000281_200 0.131242332 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
9 Hb_000155_140 0.1340960648 - - o-methyltransferase, putative [Ricinus communis]
10 Hb_009780_060 0.1371939672 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
11 Hb_006620_040 0.1387109867 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
12 Hb_007417_020 0.1402485306 - - Reticuline oxidase precursor, putative [Ricinus communis]
13 Hb_000445_020 0.140294088 - - GABA-specific permease, putative [Ricinus communis]
14 Hb_001288_010 0.1408504617 - - -
15 Hb_039562_010 0.1411211146 - - PREDICTED: protein SRG1-like [Jatropha curcas]
16 Hb_003968_020 0.1412631087 - - PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
17 Hb_004097_080 0.1432644037 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
18 Hb_002805_230 0.1433387317 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
19 Hb_010647_010 0.1436866941 - - PREDICTED: protein NP24-like [Eucalyptus grandis]
20 Hb_000019_220 0.1453296461 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF113-like [Jatropha curcas]

Gene co-expression network

sample Hb_001250_140 Hb_001250_140 Hb_058620_010 Hb_058620_010 Hb_001250_140--Hb_058620_010 Hb_002311_240 Hb_002311_240 Hb_001250_140--Hb_002311_240 Hb_000352_080 Hb_000352_080 Hb_001250_140--Hb_000352_080 Hb_012506_080 Hb_012506_080 Hb_001250_140--Hb_012506_080 Hb_135392_010 Hb_135392_010 Hb_001250_140--Hb_135392_010 Hb_001134_040 Hb_001134_040 Hb_001250_140--Hb_001134_040 Hb_058620_010--Hb_001134_040 Hb_000712_070 Hb_000712_070 Hb_058620_010--Hb_000712_070 Hb_002805_230 Hb_002805_230 Hb_058620_010--Hb_002805_230 Hb_004097_080 Hb_004097_080 Hb_058620_010--Hb_004097_080 Hb_058620_010--Hb_135392_010 Hb_003090_070 Hb_003090_070 Hb_058620_010--Hb_003090_070 Hb_010647_010 Hb_010647_010 Hb_002311_240--Hb_010647_010 Hb_000019_220 Hb_000019_220 Hb_002311_240--Hb_000019_220 Hb_003057_080 Hb_003057_080 Hb_002311_240--Hb_003057_080 Hb_005000_310 Hb_005000_310 Hb_002311_240--Hb_005000_310 Hb_000347_550 Hb_000347_550 Hb_002311_240--Hb_000347_550 Hb_000352_080--Hb_001134_040 Hb_003891_060 Hb_003891_060 Hb_000352_080--Hb_003891_060 Hb_000155_140 Hb_000155_140 Hb_000352_080--Hb_000155_140 Hb_000352_080--Hb_058620_010 Hb_000352_080--Hb_002805_230 Hb_007417_020 Hb_007417_020 Hb_000352_080--Hb_007417_020 Hb_005433_050 Hb_005433_050 Hb_012506_080--Hb_005433_050 Hb_000388_160 Hb_000388_160 Hb_012506_080--Hb_000388_160 Hb_000203_240 Hb_000203_240 Hb_012506_080--Hb_000203_240 Hb_002835_020 Hb_002835_020 Hb_012506_080--Hb_002835_020 Hb_004267_050 Hb_004267_050 Hb_012506_080--Hb_004267_050 Hb_039363_010 Hb_039363_010 Hb_012506_080--Hb_039363_010 Hb_135392_010--Hb_007417_020 Hb_007491_010 Hb_007491_010 Hb_135392_010--Hb_007491_010 Hb_135392_010--Hb_001134_040 Hb_001464_010 Hb_001464_010 Hb_135392_010--Hb_001464_010 Hb_135392_010--Hb_004097_080 Hb_001134_040--Hb_002805_230 Hb_001134_040--Hb_003090_070 Hb_001134_040--Hb_000712_070 Hb_001134_040--Hb_007417_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.538344 0.272922 0.23705 0.0295929 0.0207298
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.215293 0.254116 0 15.682 0.539978

CAGE analysis