Hb_004267_050

Information

Type -
Description -
Location Contig4267: 75555-92297
Sequence    

Annotation

kegg
ID rcu:RCOM_1592960
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID KDP38432.1
description hypothetical protein JCGZ_04357 [Jatropha curcas]
swissprot
ID Q9SZ46
description Cytochrome P450 82C4 OS=Arabidopsis thaliana GN=CYP82C4 PE=2 SV=1
trembl
ID A0A067KQL7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04357 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42044: 76303-76748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004267_050 0.0 - - hypothetical protein JCGZ_04357 [Jatropha curcas]
2 Hb_004190_030 0.037692432 - - unnamed protein product [Vitis vinifera]
3 Hb_001140_330 0.0399800157 - - PREDICTED: uncharacterized protein LOC105142675 [Populus euphratica]
4 Hb_003119_110 0.0485062857 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
5 Hb_000563_060 0.0489289709 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
6 Hb_002944_020 0.0571313119 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
7 Hb_010358_010 0.0577060782 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
8 Hb_000692_270 0.0605784703 - - PREDICTED: ornithine decarboxylase-like [Jatropha curcas]
9 Hb_039363_010 0.0621206662 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
10 Hb_002835_020 0.0622544072 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
11 Hb_038238_010 0.0650783147 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
12 Hb_106528_020 0.0660873339 - - Cationic peroxidase 2 precursor [Theobroma cacao]
13 Hb_109163_010 0.066299598 - - polyphenol oxidase [Hevea brasiliensis]
14 Hb_005433_050 0.0666746885 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
15 Hb_153208_010 0.0669957569 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
16 Hb_000388_160 0.0725748245 - - xyloglucan endo-1 family protein [Populus trichocarpa]
17 Hb_007437_010 0.0774117859 - - Polygalacturonase precursor, putative [Ricinus communis]
18 Hb_006415_020 0.0780668271 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Jatropha curcas]
19 Hb_002553_170 0.0790172044 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
20 Hb_000203_240 0.0805061889 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_004267_050 Hb_004267_050 Hb_004190_030 Hb_004190_030 Hb_004267_050--Hb_004190_030 Hb_001140_330 Hb_001140_330 Hb_004267_050--Hb_001140_330 Hb_003119_110 Hb_003119_110 Hb_004267_050--Hb_003119_110 Hb_000563_060 Hb_000563_060 Hb_004267_050--Hb_000563_060 Hb_002944_020 Hb_002944_020 Hb_004267_050--Hb_002944_020 Hb_010358_010 Hb_010358_010 Hb_004267_050--Hb_010358_010 Hb_004190_030--Hb_000563_060 Hb_004190_030--Hb_003119_110 Hb_004190_030--Hb_001140_330 Hb_039363_010 Hb_039363_010 Hb_004190_030--Hb_039363_010 Hb_004190_030--Hb_010358_010 Hb_001140_330--Hb_000563_060 Hb_001140_330--Hb_003119_110 Hb_002835_020 Hb_002835_020 Hb_001140_330--Hb_002835_020 Hb_153208_010 Hb_153208_010 Hb_001140_330--Hb_153208_010 Hb_003119_110--Hb_000563_060 Hb_003119_110--Hb_002835_020 Hb_003119_110--Hb_039363_010 Hb_000563_060--Hb_002835_020 Hb_000563_060--Hb_039363_010 Hb_000563_060--Hb_153208_010 Hb_002944_020--Hb_010358_010 Hb_002944_020--Hb_153208_010 Hb_106528_020 Hb_106528_020 Hb_002944_020--Hb_106528_020 Hb_000692_270 Hb_000692_270 Hb_002944_020--Hb_000692_270 Hb_003188_020 Hb_003188_020 Hb_002944_020--Hb_003188_020 Hb_014034_020 Hb_014034_020 Hb_002944_020--Hb_014034_020 Hb_010358_010--Hb_153208_010 Hb_010358_010--Hb_106528_020 Hb_020141_020 Hb_020141_020 Hb_010358_010--Hb_020141_020 Hb_038238_010 Hb_038238_010 Hb_010358_010--Hb_038238_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.501542 0.0566804 0.18363 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.122746 0.0362214 0.0692257 42.5523 0.0514701

CAGE analysis