Hb_106528_020

Information

Type -
Description -
Location Contig106528: 933-1319
Sequence    

Annotation

kegg
ID tcc:TCM_007512
description Cationic peroxidase 2 precursor
nr
ID XP_007043002.1
description Cationic peroxidase 2 precursor [Theobroma cacao]
swissprot
ID P22196
description Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1
trembl
ID A0A061E980
description Peroxidase OS=Theobroma cacao GN=TCM_007512 PE=3 SV=1
Gene Ontology
ID GO:0005576
description bacterial-induced peroxidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_106528_020 0.0 - - Cationic peroxidase 2 precursor [Theobroma cacao]
2 Hb_038238_010 0.0357037048 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
3 Hb_005726_030 0.0412636254 - - hypothetical protein CISIN_1g020511mg [Citrus sinensis]
4 Hb_061590_010 0.0413437853 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
5 Hb_187247_010 0.0442408799 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
6 Hb_010358_010 0.0448193019 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
7 Hb_153208_010 0.0492469028 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
8 Hb_007337_010 0.0495651738 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
9 Hb_143766_040 0.0503813529 - - PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
10 Hb_004981_020 0.0521053046 - - PREDICTED: uncharacterized protein LOC103706119 [Phoenix dactylifera]
11 Hb_007437_010 0.0527370302 - - Polygalacturonase precursor, putative [Ricinus communis]
12 Hb_002944_020 0.0554519614 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
13 Hb_004190_030 0.0580514802 - - unnamed protein product [Vitis vinifera]
14 Hb_020141_020 0.0584415704 - - -
15 Hb_005433_050 0.0593211927 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
16 Hb_006415_020 0.0597407503 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Jatropha curcas]
17 Hb_000828_030 0.0640456049 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
18 Hb_001140_330 0.0645685322 - - PREDICTED: uncharacterized protein LOC105142675 [Populus euphratica]
19 Hb_004267_050 0.0660873339 - - hypothetical protein JCGZ_04357 [Jatropha curcas]
20 Hb_000563_060 0.0674562555 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]

Gene co-expression network

sample Hb_106528_020 Hb_106528_020 Hb_038238_010 Hb_038238_010 Hb_106528_020--Hb_038238_010 Hb_005726_030 Hb_005726_030 Hb_106528_020--Hb_005726_030 Hb_061590_010 Hb_061590_010 Hb_106528_020--Hb_061590_010 Hb_187247_010 Hb_187247_010 Hb_106528_020--Hb_187247_010 Hb_010358_010 Hb_010358_010 Hb_106528_020--Hb_010358_010 Hb_153208_010 Hb_153208_010 Hb_106528_020--Hb_153208_010 Hb_007437_010 Hb_007437_010 Hb_038238_010--Hb_007437_010 Hb_038238_010--Hb_005726_030 Hb_038238_010--Hb_061590_010 Hb_006415_020 Hb_006415_020 Hb_038238_010--Hb_006415_020 Hb_038238_010--Hb_187247_010 Hb_005726_030--Hb_061590_010 Hb_005726_030--Hb_187247_010 Hb_007337_010 Hb_007337_010 Hb_005726_030--Hb_007337_010 Hb_143766_040 Hb_143766_040 Hb_005726_030--Hb_143766_040 Hb_004981_020 Hb_004981_020 Hb_005726_030--Hb_004981_020 Hb_005726_030--Hb_007437_010 Hb_061590_010--Hb_187247_010 Hb_061590_010--Hb_007337_010 Hb_061590_010--Hb_143766_040 Hb_061590_010--Hb_004981_020 Hb_061590_010--Hb_007437_010 Hb_187247_010--Hb_007337_010 Hb_187247_010--Hb_143766_040 Hb_187247_010--Hb_004981_020 Hb_002944_020 Hb_002944_020 Hb_010358_010--Hb_002944_020 Hb_010358_010--Hb_153208_010 Hb_020141_020 Hb_020141_020 Hb_010358_010--Hb_020141_020 Hb_010358_010--Hb_038238_010 Hb_004190_030 Hb_004190_030 Hb_010358_010--Hb_004190_030 Hb_003188_020 Hb_003188_020 Hb_153208_010--Hb_003188_020 Hb_153208_010--Hb_002944_020 Hb_109163_010 Hb_109163_010 Hb_153208_010--Hb_109163_010 Hb_014034_020 Hb_014034_020 Hb_153208_010--Hb_014034_020 Hb_000563_060 Hb_000563_060 Hb_153208_010--Hb_000563_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.84146 0.141301 0.297132 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.166933 0 173.928 0

CAGE analysis