Hb_109163_010

Information

Type -
Description -
Location Contig109163: 6403-8167
Sequence    

Annotation

kegg
ID rcu:RCOM_0935110
description Polyphenol oxidase, chloroplast precursor, putative (EC:1.10.3.1)
nr
ID AHF20575.1
description polyphenol oxidase [Hevea brasiliensis]
swissprot
ID P43309
description Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1
trembl
ID A0A067JAU2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21402 PE=4 SV=1
Gene Ontology
ID GO:0016491
description polyphenol chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_109163_010 0.0 - - polyphenol oxidase [Hevea brasiliensis]
2 Hb_153208_010 0.0419481629 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
3 Hb_039363_010 0.0455238473 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
4 Hb_000086_710 0.0532581274 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
5 Hb_002835_020 0.0547354243 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
6 Hb_000563_060 0.0559141731 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
7 Hb_004057_050 0.0562694942 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
8 Hb_000388_160 0.0567416574 - - xyloglucan endo-1 family protein [Populus trichocarpa]
9 Hb_001140_330 0.0596369696 - - PREDICTED: uncharacterized protein LOC105142675 [Populus euphratica]
10 Hb_038238_010 0.0608963414 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
11 Hb_004190_030 0.0613362411 - - unnamed protein product [Vitis vinifera]
12 Hb_166232_010 0.0637104492 - - hypothetical protein JCGZ_22831 [Jatropha curcas]
13 Hb_002553_170 0.0639900966 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
14 Hb_003188_020 0.0647940972 - - chitinase, putative [Ricinus communis]
15 Hb_002944_020 0.0655528328 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
16 Hb_004267_050 0.066299598 - - hypothetical protein JCGZ_04357 [Jatropha curcas]
17 Hb_001930_060 0.0672194981 - - PREDICTED: cytochrome P450 71D9-like [Fragaria vesca subsp. vesca]
18 Hb_003334_020 0.0682993987 - - hypothetical protein CISIN_1g041546mg [Citrus sinensis]
19 Hb_003334_080 0.0692193218 - - Reticuline oxidase precursor, putative [Ricinus communis]
20 Hb_001266_110 0.0708316639 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_109163_010 Hb_109163_010 Hb_153208_010 Hb_153208_010 Hb_109163_010--Hb_153208_010 Hb_039363_010 Hb_039363_010 Hb_109163_010--Hb_039363_010 Hb_000086_710 Hb_000086_710 Hb_109163_010--Hb_000086_710 Hb_002835_020 Hb_002835_020 Hb_109163_010--Hb_002835_020 Hb_000563_060 Hb_000563_060 Hb_109163_010--Hb_000563_060 Hb_004057_050 Hb_004057_050 Hb_109163_010--Hb_004057_050 Hb_003188_020 Hb_003188_020 Hb_153208_010--Hb_003188_020 Hb_002944_020 Hb_002944_020 Hb_153208_010--Hb_002944_020 Hb_010358_010 Hb_010358_010 Hb_153208_010--Hb_010358_010 Hb_014034_020 Hb_014034_020 Hb_153208_010--Hb_014034_020 Hb_153208_010--Hb_000563_060 Hb_039363_010--Hb_002835_020 Hb_039363_010--Hb_000563_060 Hb_000388_160 Hb_000388_160 Hb_039363_010--Hb_000388_160 Hb_039363_010--Hb_153208_010 Hb_004190_030 Hb_004190_030 Hb_039363_010--Hb_004190_030 Hb_001266_110 Hb_001266_110 Hb_000086_710--Hb_001266_110 Hb_000086_710--Hb_004057_050 Hb_003334_020 Hb_003334_020 Hb_000086_710--Hb_003334_020 Hb_019392_010 Hb_019392_010 Hb_000086_710--Hb_019392_010 Hb_006925_010 Hb_006925_010 Hb_000086_710--Hb_006925_010 Hb_148986_010 Hb_148986_010 Hb_000086_710--Hb_148986_010 Hb_002835_020--Hb_000563_060 Hb_002553_170 Hb_002553_170 Hb_002835_020--Hb_002553_170 Hb_002835_020--Hb_000388_160 Hb_003334_080 Hb_003334_080 Hb_002835_020--Hb_003334_080 Hb_001930_060 Hb_001930_060 Hb_002835_020--Hb_001930_060 Hb_000563_060--Hb_004190_030 Hb_001140_330 Hb_001140_330 Hb_000563_060--Hb_001140_330 Hb_003119_110 Hb_003119_110 Hb_000563_060--Hb_003119_110 Hb_004057_050--Hb_003334_020 Hb_004057_050--Hb_001266_110 Hb_080238_010 Hb_080238_010 Hb_004057_050--Hb_080238_010 Hb_004057_050--Hb_006925_010 Hb_000329_160 Hb_000329_160 Hb_004057_050--Hb_000329_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.030461 0.00912778 0.0356604 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.48875 0

CAGE analysis