Hb_003119_110

Information

Type -
Description -
Location Contig3119: 74812-80516
Sequence    

Annotation

kegg
ID rcu:RCOM_0822190
description leucoanthocyanidin dioxygenase, putative (EC:1.14.11.19)
nr
ID XP_012069285.1
description PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
swissprot
ID Q9C899
description Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1
trembl
ID A0A067L108
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24922 PE=3 SV=1
Gene Ontology
ID GO:0046872
description feruloyl ortho-hydroxylase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003119_110 0.0 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
2 Hb_004190_030 0.0289970826 - - unnamed protein product [Vitis vinifera]
3 Hb_000563_060 0.0399969913 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
4 Hb_001140_330 0.0416029947 - - PREDICTED: uncharacterized protein LOC105142675 [Populus euphratica]
5 Hb_004267_050 0.0485062857 - - hypothetical protein JCGZ_04357 [Jatropha curcas]
6 Hb_002835_020 0.0667373895 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
7 Hb_039363_010 0.0675476419 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
8 Hb_002944_020 0.072404537 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
9 Hb_010358_010 0.0736167555 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
10 Hb_005120_010 0.0744348936 - - amino acid transporter, putative [Ricinus communis]
11 Hb_009026_040 0.0744684707 - - pathogenesis-related family protein [Populus trichocarpa]
12 Hb_000388_160 0.0752102831 - - xyloglucan endo-1 family protein [Populus trichocarpa]
13 Hb_005433_050 0.0761102142 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
14 Hb_000329_160 0.0763671674 - - PREDICTED: pectinesterase 2 isoform X1 [Jatropha curcas]
15 Hb_153208_010 0.0768714314 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
16 Hb_000679_070 0.0770331507 - - hypothetical protein POPTR_0006s26840g [Populus trichocarpa]
17 Hb_002553_170 0.0775444563 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
18 Hb_109163_010 0.0778151503 - - polyphenol oxidase [Hevea brasiliensis]
19 Hb_106528_020 0.080828401 - - Cationic peroxidase 2 precursor [Theobroma cacao]
20 Hb_004057_050 0.0812791805 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]

Gene co-expression network

sample Hb_003119_110 Hb_003119_110 Hb_004190_030 Hb_004190_030 Hb_003119_110--Hb_004190_030 Hb_000563_060 Hb_000563_060 Hb_003119_110--Hb_000563_060 Hb_001140_330 Hb_001140_330 Hb_003119_110--Hb_001140_330 Hb_004267_050 Hb_004267_050 Hb_003119_110--Hb_004267_050 Hb_002835_020 Hb_002835_020 Hb_003119_110--Hb_002835_020 Hb_039363_010 Hb_039363_010 Hb_003119_110--Hb_039363_010 Hb_004190_030--Hb_000563_060 Hb_004190_030--Hb_001140_330 Hb_004190_030--Hb_004267_050 Hb_004190_030--Hb_039363_010 Hb_010358_010 Hb_010358_010 Hb_004190_030--Hb_010358_010 Hb_000563_060--Hb_002835_020 Hb_000563_060--Hb_001140_330 Hb_000563_060--Hb_039363_010 Hb_153208_010 Hb_153208_010 Hb_000563_060--Hb_153208_010 Hb_001140_330--Hb_004267_050 Hb_001140_330--Hb_002835_020 Hb_001140_330--Hb_153208_010 Hb_004267_050--Hb_000563_060 Hb_002944_020 Hb_002944_020 Hb_004267_050--Hb_002944_020 Hb_004267_050--Hb_010358_010 Hb_002835_020--Hb_039363_010 Hb_002553_170 Hb_002553_170 Hb_002835_020--Hb_002553_170 Hb_000388_160 Hb_000388_160 Hb_002835_020--Hb_000388_160 Hb_003334_080 Hb_003334_080 Hb_002835_020--Hb_003334_080 Hb_001930_060 Hb_001930_060 Hb_002835_020--Hb_001930_060 Hb_039363_010--Hb_000388_160 Hb_109163_010 Hb_109163_010 Hb_039363_010--Hb_109163_010 Hb_039363_010--Hb_153208_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.628081 0.344933 0.117547 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0479845 0.0188774 0.250199 68.403 0.159312

CAGE analysis