Hb_153208_010

Information

Type -
Description -
Location Contig153208: 56-921
Sequence    

Annotation

kegg
ID rcu:RCOM_1182920
description Cationic peroxidase 2 precursor, putative (EC:1.11.1.7)
nr
ID XP_002528494.1
description Cationic peroxidase 2 precursor, putative [Ricinus communis]
swissprot
ID P22196
description Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1
trembl
ID B9SR75
description Peroxidase OS=Ricinus communis GN=RCOM_1182920 PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase n1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153208_010 0.0 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
2 Hb_003188_020 0.033772895 - - chitinase, putative [Ricinus communis]
3 Hb_002944_020 0.0411426156 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
4 Hb_109163_010 0.0419481629 - - polyphenol oxidase [Hevea brasiliensis]
5 Hb_010358_010 0.0443247246 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
6 Hb_014034_020 0.0460352105 - - hypothetical protein POPTR_0075s00200g, partial [Populus trichocarpa]
7 Hb_000563_060 0.0471655824 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
8 Hb_039363_010 0.0474643235 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
9 Hb_020141_020 0.0478025829 - - -
10 Hb_000563_080 0.0492261734 - - -
11 Hb_106528_020 0.0492469028 - - Cationic peroxidase 2 precursor [Theobroma cacao]
12 Hb_000500_190 0.0504466696 - - hypothetical protein JCGZ_21655 [Jatropha curcas]
13 Hb_038238_010 0.051001621 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
14 Hb_001301_020 0.0522402826 - - hypothetical protein JCGZ_06575 [Jatropha curcas]
15 Hb_002835_020 0.0522796533 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
16 Hb_000388_160 0.0529795465 - - xyloglucan endo-1 family protein [Populus trichocarpa]
17 Hb_004190_030 0.0556760471 - - unnamed protein product [Vitis vinifera]
18 Hb_004254_070 0.0570196097 transcription factor TF Family: NAC hypothetical protein POPTR_0015s03700g [Populus trichocarpa]
19 Hb_001140_330 0.0576401763 - - PREDICTED: uncharacterized protein LOC105142675 [Populus euphratica]
20 Hb_166232_010 0.0607756358 - - hypothetical protein JCGZ_22831 [Jatropha curcas]

Gene co-expression network

sample Hb_153208_010 Hb_153208_010 Hb_003188_020 Hb_003188_020 Hb_153208_010--Hb_003188_020 Hb_002944_020 Hb_002944_020 Hb_153208_010--Hb_002944_020 Hb_109163_010 Hb_109163_010 Hb_153208_010--Hb_109163_010 Hb_010358_010 Hb_010358_010 Hb_153208_010--Hb_010358_010 Hb_014034_020 Hb_014034_020 Hb_153208_010--Hb_014034_020 Hb_000563_060 Hb_000563_060 Hb_153208_010--Hb_000563_060 Hb_001301_020 Hb_001301_020 Hb_003188_020--Hb_001301_020 Hb_000563_080 Hb_000563_080 Hb_003188_020--Hb_000563_080 Hb_003188_020--Hb_014034_020 Hb_004254_070 Hb_004254_070 Hb_003188_020--Hb_004254_070 Hb_000446_100 Hb_000446_100 Hb_003188_020--Hb_000446_100 Hb_002944_020--Hb_010358_010 Hb_106528_020 Hb_106528_020 Hb_002944_020--Hb_106528_020 Hb_000692_270 Hb_000692_270 Hb_002944_020--Hb_000692_270 Hb_002944_020--Hb_003188_020 Hb_002944_020--Hb_014034_020 Hb_039363_010 Hb_039363_010 Hb_109163_010--Hb_039363_010 Hb_000086_710 Hb_000086_710 Hb_109163_010--Hb_000086_710 Hb_002835_020 Hb_002835_020 Hb_109163_010--Hb_002835_020 Hb_109163_010--Hb_000563_060 Hb_004057_050 Hb_004057_050 Hb_109163_010--Hb_004057_050 Hb_010358_010--Hb_106528_020 Hb_020141_020 Hb_020141_020 Hb_010358_010--Hb_020141_020 Hb_038238_010 Hb_038238_010 Hb_010358_010--Hb_038238_010 Hb_004190_030 Hb_004190_030 Hb_010358_010--Hb_004190_030 Hb_014034_020--Hb_004254_070 Hb_000500_190 Hb_000500_190 Hb_014034_020--Hb_000500_190 Hb_014034_020--Hb_000446_100 Hb_014034_020--Hb_001301_020 Hb_000025_250 Hb_000025_250 Hb_014034_020--Hb_000025_250 Hb_000563_060--Hb_004190_030 Hb_000563_060--Hb_002835_020 Hb_001140_330 Hb_001140_330 Hb_000563_060--Hb_001140_330 Hb_000563_060--Hb_039363_010 Hb_003119_110 Hb_003119_110 Hb_000563_060--Hb_003119_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.321742 0.0631009 0.113657 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 16.5871 0

CAGE analysis