Hb_007337_010

Information

Type -
Description -
Location Contig7337: 15936-16602
Sequence    

Annotation

kegg
ID rcu:RCOM_1045360
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.26)
nr
ID XP_012079697.1
description PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KIC1
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_14814 PE=3 SV=1
Gene Ontology
ID GO:0016740
description s-locus lectin protein kinase family isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007337_010 0.0 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
2 Hb_143766_040 0.0014520635 - - PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
3 Hb_004981_020 0.0043741476 - - PREDICTED: uncharacterized protein LOC103706119 [Phoenix dactylifera]
4 Hb_187247_010 0.0114984568 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
5 Hb_061590_010 0.0243487181 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
6 Hb_005726_030 0.0256324167 - - hypothetical protein CISIN_1g020511mg [Citrus sinensis]
7 Hb_126040_020 0.0396017771 - - -
8 Hb_000201_080 0.0445744133 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_001604_140 0.0492393686 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
10 Hb_106528_020 0.0495651738 - - Cationic peroxidase 2 precursor [Theobroma cacao]
11 Hb_003685_060 0.0520513815 - - PREDICTED: laccase-15 [Jatropha curcas]
12 Hb_000022_270 0.0545809657 - - conserved hypothetical protein [Ricinus communis]
13 Hb_038238_010 0.0583032608 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
14 Hb_007437_010 0.0600375599 - - Polygalacturonase precursor, putative [Ricinus communis]
15 Hb_010358_010 0.0633902572 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
16 Hb_020141_020 0.0681752409 - - -
17 Hb_001675_210 0.0695053581 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
18 Hb_006415_020 0.0701195219 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Jatropha curcas]
19 Hb_000828_030 0.0734945577 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
20 Hb_005433_050 0.0773569276 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]

Gene co-expression network

sample Hb_007337_010 Hb_007337_010 Hb_143766_040 Hb_143766_040 Hb_007337_010--Hb_143766_040 Hb_004981_020 Hb_004981_020 Hb_007337_010--Hb_004981_020 Hb_187247_010 Hb_187247_010 Hb_007337_010--Hb_187247_010 Hb_061590_010 Hb_061590_010 Hb_007337_010--Hb_061590_010 Hb_005726_030 Hb_005726_030 Hb_007337_010--Hb_005726_030 Hb_126040_020 Hb_126040_020 Hb_007337_010--Hb_126040_020 Hb_143766_040--Hb_004981_020 Hb_143766_040--Hb_187247_010 Hb_143766_040--Hb_061590_010 Hb_143766_040--Hb_005726_030 Hb_143766_040--Hb_126040_020 Hb_004981_020--Hb_187247_010 Hb_004981_020--Hb_061590_010 Hb_004981_020--Hb_005726_030 Hb_004981_020--Hb_126040_020 Hb_187247_010--Hb_061590_010 Hb_187247_010--Hb_005726_030 Hb_106528_020 Hb_106528_020 Hb_187247_010--Hb_106528_020 Hb_061590_010--Hb_005726_030 Hb_007437_010 Hb_007437_010 Hb_061590_010--Hb_007437_010 Hb_005726_030--Hb_007437_010 Hb_000201_080 Hb_000201_080 Hb_126040_020--Hb_000201_080 Hb_001604_140 Hb_001604_140 Hb_126040_020--Hb_001604_140 Hb_003685_060 Hb_003685_060 Hb_126040_020--Hb_003685_060 Hb_000022_270 Hb_000022_270 Hb_126040_020--Hb_000022_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.044572 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.34564 0

CAGE analysis