Hb_135392_010

Information

Type -
Description -
Location Contig135392: 7176-8850
Sequence    

Annotation

kegg
ID tcc:TCM_006986
description 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein
nr
ID XP_012072466.1
description PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
swissprot
ID Q43383
description 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2
trembl
ID A0A067KQ73
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04895 PE=3 SV=1
Gene Ontology
ID GO:0005506
description flavonol synthase flavanone 3-hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135392_010 0.0 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
2 Hb_007417_020 0.0483007251 - - Reticuline oxidase precursor, putative [Ricinus communis]
3 Hb_007491_010 0.059241291 - - Spotted leaf protein, putative [Ricinus communis]
4 Hb_001134_040 0.0726009372 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
5 Hb_058620_010 0.0756460203 - - cytochrome P450, putative [Ricinus communis]
6 Hb_001464_010 0.0782295919 - - PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Populus euphratica]
7 Hb_004097_080 0.0788438204 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
8 Hb_039562_010 0.078990309 - - PREDICTED: protein SRG1-like [Jatropha curcas]
9 Hb_003237_040 0.0889754931 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
10 Hb_004448_030 0.0912966635 - - PREDICTED: RING-H2 finger protein ATL40-like [Jatropha curcas]
11 Hb_003090_070 0.0957987721 - - PREDICTED: laccase-7 [Jatropha curcas]
12 Hb_002805_230 0.0984233456 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
13 Hb_000712_070 0.0994694808 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000155_140 0.100554315 - - o-methyltransferase, putative [Ricinus communis]
15 Hb_002173_080 0.1040444689 - - alcohol dehydrogenase, putative [Ricinus communis]
16 Hb_000229_080 0.1061714706 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
17 Hb_000712_060 0.1111411361 - - PREDICTED: uncharacterized protein LOC105631517 [Jatropha curcas]
18 Hb_023732_020 0.1120814382 - - PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]
19 Hb_003334_080 0.1137779135 - - Reticuline oxidase precursor, putative [Ricinus communis]
20 Hb_000141_070 0.1150894941 - - l-lactate dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_135392_010 Hb_135392_010 Hb_007417_020 Hb_007417_020 Hb_135392_010--Hb_007417_020 Hb_007491_010 Hb_007491_010 Hb_135392_010--Hb_007491_010 Hb_001134_040 Hb_001134_040 Hb_135392_010--Hb_001134_040 Hb_058620_010 Hb_058620_010 Hb_135392_010--Hb_058620_010 Hb_001464_010 Hb_001464_010 Hb_135392_010--Hb_001464_010 Hb_004097_080 Hb_004097_080 Hb_135392_010--Hb_004097_080 Hb_007417_020--Hb_001464_010 Hb_007417_020--Hb_001134_040 Hb_007417_020--Hb_007491_010 Hb_003090_070 Hb_003090_070 Hb_007417_020--Hb_003090_070 Hb_002805_230 Hb_002805_230 Hb_007417_020--Hb_002805_230 Hb_003237_040 Hb_003237_040 Hb_007491_010--Hb_003237_040 Hb_007491_010--Hb_001464_010 Hb_004448_030 Hb_004448_030 Hb_007491_010--Hb_004448_030 Hb_007491_010--Hb_004097_080 Hb_001134_040--Hb_002805_230 Hb_001134_040--Hb_058620_010 Hb_001134_040--Hb_003090_070 Hb_000712_070 Hb_000712_070 Hb_001134_040--Hb_000712_070 Hb_058620_010--Hb_000712_070 Hb_058620_010--Hb_002805_230 Hb_058620_010--Hb_004097_080 Hb_058620_010--Hb_003090_070 Hb_001464_010--Hb_001134_040 Hb_004055_180 Hb_004055_180 Hb_001464_010--Hb_004055_180 Hb_097908_010 Hb_097908_010 Hb_001464_010--Hb_097908_010 Hb_004097_080--Hb_000712_070 Hb_039562_010 Hb_039562_010 Hb_004097_080--Hb_039562_010 Hb_003334_080 Hb_003334_080 Hb_004097_080--Hb_003334_080 Hb_004097_080--Hb_001134_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.3003 0.312663 0.141374 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 11.89 0.397721

CAGE analysis