Hb_003435_060

Information

Type -
Description -
Location Contig3435: 81762-83450
Sequence    

Annotation

kegg
ID rcu:RCOM_1353440
description carbonic anhydrase, putative (EC:4.2.1.1)
nr
ID XP_002519458.1
description carbonic anhydrase, putative [Ricinus communis]
swissprot
ID Q8L817
description Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=1
trembl
ID B9S0D9
description Carbonic anhydrase, putative OS=Ricinus communis GN=RCOM_1353440 PE=4 SV=1
Gene Ontology
ID GO:0004089
description alpha carbonic anhydrase 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003435_060 0.0 - - carbonic anhydrase, putative [Ricinus communis]
2 Hb_008014_030 0.1675736279 - - Aquaporin NIP1.1, putative [Ricinus communis]
3 Hb_001045_050 0.2022481062 transcription factor TF Family: WRKY hypothetical protein POPTR_0001s33560g [Populus trichocarpa]
4 Hb_000300_130 0.2184345916 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105141503 [Populus euphratica]
5 Hb_024621_030 0.2266405131 - - tetraketide alpha-pyrone reductase 2 [Jatropha curcas]
6 Hb_003106_120 0.2294123814 - - PREDICTED: uncharacterized protein LOC105640439 [Jatropha curcas]
7 Hb_001720_060 0.2425059304 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 55-like [Jatropha curcas]
8 Hb_000140_160 0.2437349486 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
9 Hb_000597_110 0.2571754783 - - PREDICTED: VQ motif-containing protein 22-like [Jatropha curcas]
10 Hb_001101_030 0.2584566059 - - hypothetical protein JCGZ_00046 [Jatropha curcas]
11 Hb_032631_010 0.2586534276 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
12 Hb_105328_030 0.2593512086 - - Putative retroelement [Oryza sativa Japonica Group]
13 Hb_001832_020 0.2596496248 - - PREDICTED: uncharacterized protein LOC104584029 [Brachypodium distachyon]
14 Hb_070277_010 0.2626354495 - - PREDICTED: purine permease 3-like [Jatropha curcas]
15 Hb_031527_060 0.267757613 - - glutamate decarboxylase, putative [Ricinus communis]
16 Hb_001856_090 0.268583653 - - Cellulose synthase-like B3, putative isoform 2 [Theobroma cacao]
17 Hb_004195_110 0.2701179176 - - hypothetical protein JCGZ_24010 [Jatropha curcas]
18 Hb_001776_190 0.2746196004 - - PREDICTED: protein kinase 2A, chloroplastic-like [Jatropha curcas]
19 Hb_001206_090 0.2773108066 - - pyruvate decarboxylase [Hevea brasiliensis]
20 Hb_001085_100 0.2828270476 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]

Gene co-expression network

sample Hb_003435_060 Hb_003435_060 Hb_008014_030 Hb_008014_030 Hb_003435_060--Hb_008014_030 Hb_001045_050 Hb_001045_050 Hb_003435_060--Hb_001045_050 Hb_000300_130 Hb_000300_130 Hb_003435_060--Hb_000300_130 Hb_024621_030 Hb_024621_030 Hb_003435_060--Hb_024621_030 Hb_003106_120 Hb_003106_120 Hb_003435_060--Hb_003106_120 Hb_001720_060 Hb_001720_060 Hb_003435_060--Hb_001720_060 Hb_008014_030--Hb_000300_130 Hb_008014_030--Hb_001045_050 Hb_001101_030 Hb_001101_030 Hb_008014_030--Hb_001101_030 Hb_183623_010 Hb_183623_010 Hb_008014_030--Hb_183623_010 Hb_000140_160 Hb_000140_160 Hb_008014_030--Hb_000140_160 Hb_001045_050--Hb_000140_160 Hb_001045_050--Hb_001101_030 Hb_002006_140 Hb_002006_140 Hb_001045_050--Hb_002006_140 Hb_000500_110 Hb_000500_110 Hb_001045_050--Hb_000500_110 Hb_000597_110 Hb_000597_110 Hb_001045_050--Hb_000597_110 Hb_031527_060 Hb_031527_060 Hb_000300_130--Hb_031527_060 Hb_009545_020 Hb_009545_020 Hb_000300_130--Hb_009545_020 Hb_000165_210 Hb_000165_210 Hb_000300_130--Hb_000165_210 Hb_001206_090 Hb_001206_090 Hb_000300_130--Hb_001206_090 Hb_000300_130--Hb_183623_010 Hb_001148_030 Hb_001148_030 Hb_000300_130--Hb_001148_030 Hb_000390_260 Hb_000390_260 Hb_024621_030--Hb_000390_260 Hb_004800_170 Hb_004800_170 Hb_024621_030--Hb_004800_170 Hb_000699_170 Hb_000699_170 Hb_024621_030--Hb_000699_170 Hb_024621_030--Hb_001045_050 Hb_000975_150 Hb_000975_150 Hb_024621_030--Hb_000975_150 Hb_002486_010 Hb_002486_010 Hb_003106_120--Hb_002486_010 Hb_013766_010 Hb_013766_010 Hb_003106_120--Hb_013766_010 Hb_001565_110 Hb_001565_110 Hb_003106_120--Hb_001565_110 Hb_007747_180 Hb_007747_180 Hb_003106_120--Hb_007747_180 Hb_002253_060 Hb_002253_060 Hb_003106_120--Hb_002253_060 Hb_008289_050 Hb_008289_050 Hb_001720_060--Hb_008289_050 Hb_027472_230 Hb_027472_230 Hb_001720_060--Hb_027472_230 Hb_004195_180 Hb_004195_180 Hb_001720_060--Hb_004195_180 Hb_001720_060--Hb_002253_060 Hb_004460_050 Hb_004460_050 Hb_001720_060--Hb_004460_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0215698 2.98369 0.11858 0.280353 0.0634906 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.197538 2.25281 1.07384 7.18161 0

CAGE analysis