Hb_000009_440

Information

Type -
Description -
Location Contig9: 457482-457991
Sequence    

Annotation

kegg
ID rcu:RCOM_0604190
description hypothetical protein
nr
ID XP_012079119.1
description PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KHU8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12291 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_440 0.0 - - PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]
2 Hb_010672_080 0.1275385572 transcription factor TF Family: MYB hypothetical protein JCGZ_00902 [Jatropha curcas]
3 Hb_101449_010 0.1547213078 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
4 Hb_000720_090 0.1629139626 transcription factor TF Family: MYB myb, putative [Ricinus communis]
5 Hb_000707_010 0.1735590757 - - hypothetical protein JCGZ_25098 [Jatropha curcas]
6 Hb_000625_030 0.1757603548 - - PREDICTED: calmodulin-lysine N-methyltransferase [Jatropha curcas]
7 Hb_004041_100 0.1838482916 - - -
8 Hb_033594_100 0.1901521572 transcription factor TF Family: GNAT PREDICTED: probable amino-acid acetyltransferase NAGS1, chloroplastic isoform X1 [Jatropha curcas]
9 Hb_002811_020 0.1902552357 - - Cysteine synthase [Morus notabilis]
10 Hb_000574_250 0.1975160592 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
11 Hb_053929_010 0.198510209 - - hypothetical protein POPTR_0010s22320g [Populus trichocarpa]
12 Hb_000181_020 0.1998698528 - - PREDICTED: D-amino-acid transaminase, chloroplastic-like [Jatropha curcas]
13 Hb_000656_200 0.2033767355 - - PREDICTED: uncharacterized protein LOC105631373 [Jatropha curcas]
14 Hb_000327_070 0.2039082966 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor TOE3 isoform X2 [Jatropha curcas]
15 Hb_000343_040 0.2055342986 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
16 Hb_000453_240 0.2063419548 rubber biosynthesis Gene Name: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [Hevea brasiliensis]
17 Hb_000046_610 0.2066234573 - - PREDICTED: putative cullin-like protein 2 isoform X3 [Populus euphratica]
18 Hb_046998_010 0.2075889957 desease resistance Gene Name: LRR_4 Disease resistance protein RPM1, putative [Ricinus communis]
19 Hb_008749_020 0.2080523787 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001405_150 0.2090882778 - - PREDICTED: protein At-4/1 [Jatropha curcas]

Gene co-expression network

sample Hb_000009_440 Hb_000009_440 Hb_010672_080 Hb_010672_080 Hb_000009_440--Hb_010672_080 Hb_101449_010 Hb_101449_010 Hb_000009_440--Hb_101449_010 Hb_000720_090 Hb_000720_090 Hb_000009_440--Hb_000720_090 Hb_000707_010 Hb_000707_010 Hb_000009_440--Hb_000707_010 Hb_000625_030 Hb_000625_030 Hb_000009_440--Hb_000625_030 Hb_004041_100 Hb_004041_100 Hb_000009_440--Hb_004041_100 Hb_010672_080--Hb_000720_090 Hb_010672_080--Hb_000707_010 Hb_010672_080--Hb_000625_030 Hb_003086_010 Hb_003086_010 Hb_010672_080--Hb_003086_010 Hb_000343_040 Hb_000343_040 Hb_010672_080--Hb_000343_040 Hb_033594_100 Hb_033594_100 Hb_101449_010--Hb_033594_100 Hb_001268_300 Hb_001268_300 Hb_101449_010--Hb_001268_300 Hb_082683_010 Hb_082683_010 Hb_101449_010--Hb_082683_010 Hb_011853_010 Hb_011853_010 Hb_101449_010--Hb_011853_010 Hb_152868_030 Hb_152868_030 Hb_101449_010--Hb_152868_030 Hb_000720_090--Hb_000707_010 Hb_000720_090--Hb_000625_030 Hb_008749_020 Hb_008749_020 Hb_000720_090--Hb_008749_020 Hb_000042_380 Hb_000042_380 Hb_000720_090--Hb_000042_380 Hb_002527_060 Hb_002527_060 Hb_000720_090--Hb_002527_060 Hb_008695_150 Hb_008695_150 Hb_000720_090--Hb_008695_150 Hb_134911_010 Hb_134911_010 Hb_000707_010--Hb_134911_010 Hb_000077_400 Hb_000077_400 Hb_000707_010--Hb_000077_400 Hb_021409_140 Hb_021409_140 Hb_000707_010--Hb_021409_140 Hb_000707_010--Hb_000042_380 Hb_001439_040 Hb_001439_040 Hb_000707_010--Hb_001439_040 Hb_000625_030--Hb_008749_020 Hb_000625_030--Hb_004041_100 Hb_000181_020 Hb_000181_020 Hb_000625_030--Hb_000181_020 Hb_001500_070 Hb_001500_070 Hb_000625_030--Hb_001500_070 Hb_001040_150 Hb_001040_150 Hb_000625_030--Hb_001040_150 Hb_000347_110 Hb_000347_110 Hb_004041_100--Hb_000347_110 Hb_004041_100--Hb_000181_020 Hb_000173_260 Hb_000173_260 Hb_004041_100--Hb_000173_260 Hb_004041_100--Hb_008749_020 Hb_004041_100--Hb_001500_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0555598 0.382716 0.401545 0.459303 0.0560138 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.129944 0.204179 0 1.65218 0.958407

CAGE analysis