Hb_032699_010

Information

Type -
Description -
Location Contig32699: 11130-14137
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022673mg
description hypothetical protein
nr
ID XP_009787832.1
description PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
swissprot
ID P20825
description Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1
trembl
ID M5X787
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032699_010 0.0 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
2 Hb_010012_010 0.2057448612 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000300_150 0.2107879751 - - Peroxidase 44 precursor, putative [Ricinus communis]
4 Hb_003090_260 0.2339989393 - - hypothetical protein JCGZ_25097 [Jatropha curcas]
5 Hb_002639_140 0.2416684623 - - PREDICTED: 4-coumarate--CoA ligase-like 5 [Jatropha curcas]
6 Hb_004734_010 0.2488438269 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
7 Hb_023226_100 0.2509509837 - - PREDICTED: uncharacterized protein LOC104903172 [Beta vulgaris subsp. vulgaris]
8 Hb_000062_260 0.2521084628 - - PREDICTED: uncharacterized protein LOC105644756 [Jatropha curcas]
9 Hb_002035_120 0.2521322451 - - PREDICTED: pentatricopeptide repeat-containing protein At3g14330 [Jatropha curcas]
10 Hb_009393_220 0.2523624168 transcription factor TF Family: Tify JAZ11 [Hevea brasiliensis]
11 Hb_001969_110 0.2609258282 - - PREDICTED: pentatricopeptide repeat-containing protein At1g15510, chloroplastic [Jatropha curcas]
12 Hb_004223_030 0.2612136049 - - PREDICTED: uncharacterized protein LOC105635347 isoform X1 [Jatropha curcas]
13 Hb_001322_140 0.2647429738 - - PREDICTED: 50S ribosomal protein L19-1, chloroplastic [Jatropha curcas]
14 Hb_001229_040 0.2653963033 - - PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
15 Hb_002184_110 0.2659614206 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 [Jatropha curcas]
16 Hb_000196_070 0.2673226577 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH80-like [Jatropha curcas]
17 Hb_004712_150 0.2673774641 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_003952_060 0.2674113068 - - hypothetical protein POPTR_0016s11000g [Populus trichocarpa]
19 Hb_000352_270 0.2676747727 - - PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like [Jatropha curcas]
20 Hb_002284_280 0.2686278449 transcription factor TF Family: HMG high mobility group protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_032699_010 Hb_032699_010 Hb_010012_010 Hb_010012_010 Hb_032699_010--Hb_010012_010 Hb_000300_150 Hb_000300_150 Hb_032699_010--Hb_000300_150 Hb_003090_260 Hb_003090_260 Hb_032699_010--Hb_003090_260 Hb_002639_140 Hb_002639_140 Hb_032699_010--Hb_002639_140 Hb_004734_010 Hb_004734_010 Hb_032699_010--Hb_004734_010 Hb_023226_100 Hb_023226_100 Hb_032699_010--Hb_023226_100 Hb_009393_220 Hb_009393_220 Hb_010012_010--Hb_009393_220 Hb_005725_030 Hb_005725_030 Hb_010012_010--Hb_005725_030 Hb_011930_110 Hb_011930_110 Hb_010012_010--Hb_011930_110 Hb_000424_060 Hb_000424_060 Hb_010012_010--Hb_000424_060 Hb_042509_030 Hb_042509_030 Hb_010012_010--Hb_042509_030 Hb_002184_110 Hb_002184_110 Hb_010012_010--Hb_002184_110 Hb_000300_150--Hb_004734_010 Hb_000366_010 Hb_000366_010 Hb_000300_150--Hb_000366_010 Hb_004712_150 Hb_004712_150 Hb_000300_150--Hb_004712_150 Hb_000103_480 Hb_000103_480 Hb_000300_150--Hb_000103_480 Hb_003952_060 Hb_003952_060 Hb_000300_150--Hb_003952_060 Hb_001625_030 Hb_001625_030 Hb_003090_260--Hb_001625_030 Hb_004223_030 Hb_004223_030 Hb_003090_260--Hb_004223_030 Hb_011671_410 Hb_011671_410 Hb_003090_260--Hb_011671_410 Hb_005725_210 Hb_005725_210 Hb_003090_260--Hb_005725_210 Hb_001969_110 Hb_001969_110 Hb_003090_260--Hb_001969_110 Hb_002704_070 Hb_002704_070 Hb_003090_260--Hb_002704_070 Hb_000080_120 Hb_000080_120 Hb_002639_140--Hb_000080_120 Hb_001322_140 Hb_001322_140 Hb_002639_140--Hb_001322_140 Hb_002780_020 Hb_002780_020 Hb_002639_140--Hb_002780_020 Hb_003794_010 Hb_003794_010 Hb_002639_140--Hb_003794_010 Hb_000627_250 Hb_000627_250 Hb_002639_140--Hb_000627_250 Hb_000062_260 Hb_000062_260 Hb_002639_140--Hb_000062_260 Hb_000189_140 Hb_000189_140 Hb_004734_010--Hb_000189_140 Hb_003656_060 Hb_003656_060 Hb_004734_010--Hb_003656_060 Hb_001373_180 Hb_001373_180 Hb_004734_010--Hb_001373_180 Hb_001473_040 Hb_001473_040 Hb_004734_010--Hb_001473_040 Hb_001511_070 Hb_001511_070 Hb_004734_010--Hb_001511_070 Hb_005883_020 Hb_005883_020 Hb_023226_100--Hb_005883_020 Hb_000358_140 Hb_000358_140 Hb_023226_100--Hb_000358_140 Hb_001916_100 Hb_001916_100 Hb_023226_100--Hb_001916_100 Hb_000349_240 Hb_000349_240 Hb_023226_100--Hb_000349_240 Hb_014497_090 Hb_014497_090 Hb_023226_100--Hb_014497_090 Hb_018118_010 Hb_018118_010 Hb_023226_100--Hb_018118_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0179762 0.0239209 0.0164176 0 0.00679548 0.0190356
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0164738 0.0129632 0.0247448 0 0.0275939

CAGE analysis