Hb_014720_130

Information

Type -
Description -
Location Contig14720: 153190-155696
Sequence    

Annotation

kegg
ID pop:POPTR_0015s08920g
description POPTRDRAFT_575176; hypothetical protein
nr
ID XP_012080047.1
description PREDICTED: uncharacterized protein LOC105640368 [Jatropha curcas]
swissprot
ID A8ILE7
description Protein ApaG OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=apaG PE=3 SV=1
trembl
ID A0A067KFP9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11461 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014720_130 0.0 - - PREDICTED: uncharacterized protein LOC105640368 [Jatropha curcas]
2 Hb_002290_020 0.3194324108 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000808_200 0.347464342 transcription factor TF Family: Orphans PREDICTED: histidine kinase CKI1-like [Jatropha curcas]
4 Hb_005016_140 0.3594013106 - - PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic isoform X1 [Jatropha curcas]
5 Hb_037281_010 0.3670113986 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
6 Hb_000699_100 0.3680820591 - - PREDICTED: pentatricopeptide repeat-containing protein At2g01510, mitochondrial-like [Jatropha curcas]
7 Hb_000134_280 0.3686513359 - - PREDICTED: uncharacterized protein LOC105628677 [Jatropha curcas]
8 Hb_000424_040 0.3687087377 - - PREDICTED: uncharacterized protein LOC105638080 [Jatropha curcas]
9 Hb_023732_050 0.3705317052 - - aldo-keto reductase, putative [Ricinus communis]
10 Hb_000710_090 0.3725327343 - - PREDICTED: uncharacterized protein LOC104583249 [Brachypodium distachyon]
11 Hb_006916_060 0.373337702 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
12 Hb_003752_060 0.3736211141 - - PREDICTED: epoxide hydrolase 3 [Jatropha curcas]
13 Hb_007426_170 0.3755201419 transcription factor TF Family: TCP -
14 Hb_005488_160 0.376182185 - - PREDICTED: maltose excess protein 1, chloroplastic-like [Jatropha curcas]
15 Hb_007694_060 0.3776389391 - - PREDICTED: 50S ribosomal protein L35, chloroplastic [Jatropha curcas]
16 Hb_002893_110 0.3778966683 transcription factor TF Family: DBP PREDICTED: probable protein phosphatase 2C 22 isoform X2 [Jatropha curcas]
17 Hb_003786_080 0.379757718 - - electron transporter, putative [Ricinus communis]
18 Hb_000005_130 0.3835521094 - - hypothetical protein POPTR_0004s22660g [Populus trichocarpa]
19 Hb_003304_030 0.3859522395 - - PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X2 [Jatropha curcas]
20 Hb_000977_270 0.3862958926 - - PREDICTED: phosphoglycolate phosphatase 1B, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_014720_130 Hb_014720_130 Hb_002290_020 Hb_002290_020 Hb_014720_130--Hb_002290_020 Hb_000808_200 Hb_000808_200 Hb_014720_130--Hb_000808_200 Hb_005016_140 Hb_005016_140 Hb_014720_130--Hb_005016_140 Hb_037281_010 Hb_037281_010 Hb_014720_130--Hb_037281_010 Hb_000699_100 Hb_000699_100 Hb_014720_130--Hb_000699_100 Hb_000134_280 Hb_000134_280 Hb_014720_130--Hb_000134_280 Hb_000431_150 Hb_000431_150 Hb_002290_020--Hb_000431_150 Hb_002290_020--Hb_000699_100 Hb_001638_310 Hb_001638_310 Hb_002290_020--Hb_001638_310 Hb_002290_020--Hb_005016_140 Hb_021576_080 Hb_021576_080 Hb_002290_020--Hb_021576_080 Hb_000260_430 Hb_000260_430 Hb_002290_020--Hb_000260_430 Hb_000011_040 Hb_000011_040 Hb_000808_200--Hb_000011_040 Hb_000011_410 Hb_000011_410 Hb_000808_200--Hb_000011_410 Hb_000017_350 Hb_000017_350 Hb_000808_200--Hb_000017_350 Hb_003786_080 Hb_003786_080 Hb_000808_200--Hb_003786_080 Hb_008279_030 Hb_008279_030 Hb_000808_200--Hb_008279_030 Hb_000367_250 Hb_000367_250 Hb_000808_200--Hb_000367_250 Hb_001454_150 Hb_001454_150 Hb_005016_140--Hb_001454_150 Hb_004871_010 Hb_004871_010 Hb_005016_140--Hb_004871_010 Hb_000976_190 Hb_000976_190 Hb_005016_140--Hb_000976_190 Hb_000194_010 Hb_000194_010 Hb_005016_140--Hb_000194_010 Hb_000061_150 Hb_000061_150 Hb_005016_140--Hb_000061_150 Hb_011310_140 Hb_011310_140 Hb_005016_140--Hb_011310_140 Hb_187951_010 Hb_187951_010 Hb_037281_010--Hb_187951_010 Hb_004076_040 Hb_004076_040 Hb_037281_010--Hb_004076_040 Hb_184746_010 Hb_184746_010 Hb_037281_010--Hb_184746_010 Hb_020469_010 Hb_020469_010 Hb_037281_010--Hb_020469_010 Hb_002235_290 Hb_002235_290 Hb_037281_010--Hb_002235_290 Hb_005147_080 Hb_005147_080 Hb_000699_100--Hb_005147_080 Hb_000424_040 Hb_000424_040 Hb_000699_100--Hb_000424_040 Hb_167103_010 Hb_167103_010 Hb_000699_100--Hb_167103_010 Hb_000699_100--Hb_005016_140 Hb_002660_190 Hb_002660_190 Hb_000699_100--Hb_002660_190 Hb_002290_030 Hb_002290_030 Hb_000699_100--Hb_002290_030 Hb_003813_020 Hb_003813_020 Hb_000134_280--Hb_003813_020 Hb_027472_100 Hb_027472_100 Hb_000134_280--Hb_027472_100 Hb_000638_160 Hb_000638_160 Hb_000134_280--Hb_000638_160 Hb_001490_030 Hb_001490_030 Hb_000134_280--Hb_001490_030 Hb_003304_030 Hb_003304_030 Hb_000134_280--Hb_003304_030 Hb_000627_300 Hb_000627_300 Hb_000134_280--Hb_000627_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.362556 0 0.0532277 0.145287
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.198141 0.180037 0 0.399746

CAGE analysis