Hb_000011_040

Information

Type -
Description -
Location Contig11: 116452-119774
Sequence    

Annotation

kegg
ID rcu:RCOM_0622130
description serine-threonine protein kinase, plant-type, putative (EC:2.7.10.2)
nr
ID KDP40594.1
description hypothetical protein JCGZ_24593 [Jatropha curcas]
swissprot
ID P0DH62
description Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1
trembl
ID A0A067L914
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24593 PE=4 SV=1
Gene Ontology
ID GO:0004715
description inactive protein kinase selmodraft_444075-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02954: 118263-118526
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000011_040 0.0 - - hypothetical protein JCGZ_24593 [Jatropha curcas]
2 Hb_002085_050 0.1828869451 - - PREDICTED: beta-galactosidase 8 [Jatropha curcas]
3 Hb_001369_100 0.211524315 - - hypothetical protein JCGZ_26280 [Jatropha curcas]
4 Hb_000152_490 0.2142801478 - - PREDICTED: (6-4)DNA photolyase [Jatropha curcas]
5 Hb_002817_040 0.2165836126 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
6 Hb_121089_050 0.2178133354 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000096_190 0.2285586155 - - unknown [Lotus japonicus]
8 Hb_002759_120 0.2309005104 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002518_100 0.2342282045 - - -
10 Hb_007904_060 0.2354708241 - - PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1 [Jatropha curcas]
11 Hb_000023_270 0.2358364295 - - conserved hypothetical protein [Ricinus communis]
12 Hb_012180_060 0.2365924684 - - peptidase, putative [Ricinus communis]
13 Hb_000808_200 0.2374319464 transcription factor TF Family: Orphans PREDICTED: histidine kinase CKI1-like [Jatropha curcas]
14 Hb_009079_050 0.2377246333 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
15 Hb_000749_020 0.2378071645 - - Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobroma cacao]
16 Hb_014497_010 0.2394190911 - - PREDICTED: uncharacterized protein LOC105635153 [Jatropha curcas]
17 Hb_000152_440 0.2403095263 - - PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
18 Hb_005063_080 0.2417500414 - - PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
19 Hb_009913_040 0.2421047881 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
20 Hb_000086_210 0.2428500244 - - ABC transporter family protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_000011_040 Hb_000011_040 Hb_002085_050 Hb_002085_050 Hb_000011_040--Hb_002085_050 Hb_001369_100 Hb_001369_100 Hb_000011_040--Hb_001369_100 Hb_000152_490 Hb_000152_490 Hb_000011_040--Hb_000152_490 Hb_002817_040 Hb_002817_040 Hb_000011_040--Hb_002817_040 Hb_121089_050 Hb_121089_050 Hb_000011_040--Hb_121089_050 Hb_000096_190 Hb_000096_190 Hb_000011_040--Hb_000096_190 Hb_097495_010 Hb_097495_010 Hb_002085_050--Hb_097495_010 Hb_015531_020 Hb_015531_020 Hb_002085_050--Hb_015531_020 Hb_009687_020 Hb_009687_020 Hb_002085_050--Hb_009687_020 Hb_002085_050--Hb_001369_100 Hb_002759_120 Hb_002759_120 Hb_002085_050--Hb_002759_120 Hb_000049_180 Hb_000049_180 Hb_002085_050--Hb_000049_180 Hb_009079_050 Hb_009079_050 Hb_001369_100--Hb_009079_050 Hb_001369_100--Hb_002817_040 Hb_005563_010 Hb_005563_010 Hb_001369_100--Hb_005563_010 Hb_001628_120 Hb_001628_120 Hb_001369_100--Hb_001628_120 Hb_001369_100--Hb_000096_190 Hb_000139_300 Hb_000139_300 Hb_001369_100--Hb_000139_300 Hb_005333_200 Hb_005333_200 Hb_000152_490--Hb_005333_200 Hb_000152_490--Hb_002759_120 Hb_000108_150 Hb_000108_150 Hb_000152_490--Hb_000108_150 Hb_001269_500 Hb_001269_500 Hb_000152_490--Hb_001269_500 Hb_003752_090 Hb_003752_090 Hb_000152_490--Hb_003752_090 Hb_000465_440 Hb_000465_440 Hb_000152_490--Hb_000465_440 Hb_002817_040--Hb_009079_050 Hb_000749_020 Hb_000749_020 Hb_002817_040--Hb_000749_020 Hb_002817_040--Hb_000108_150 Hb_000612_090 Hb_000612_090 Hb_002817_040--Hb_000612_090 Hb_002028_180 Hb_002028_180 Hb_002817_040--Hb_002028_180 Hb_004041_050 Hb_004041_050 Hb_121089_050--Hb_004041_050 Hb_121089_050--Hb_002817_040 Hb_000649_040 Hb_000649_040 Hb_121089_050--Hb_000649_040 Hb_048476_140 Hb_048476_140 Hb_121089_050--Hb_048476_140 Hb_121089_050--Hb_002028_180 Hb_121089_050--Hb_005563_010 Hb_000096_190--Hb_000049_180 Hb_000096_190--Hb_002759_120 Hb_042083_040 Hb_042083_040 Hb_000096_190--Hb_042083_040 Hb_000049_160 Hb_000049_160 Hb_000096_190--Hb_000049_160 Hb_000962_070 Hb_000962_070 Hb_000096_190--Hb_000962_070 Hb_002182_020 Hb_002182_020 Hb_000096_190--Hb_002182_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00891975 0.132215 0.122404 0.0432636 0.0398772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0386431 0.0365615 0.0153856 0.162953

CAGE analysis