Hb_014320_010

Information

Type -
Description -
Location Contig14320: 45663-46611
Sequence    

Annotation

kegg
ID cmo:103503567
description uncharacterized LOC103503567
nr
ID XP_012066976.1
description PREDICTED: uncharacterized protein LOC105629932 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDV1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02954 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11386: 45663-46574
cDNA
(Sanger)
(ID:Location)		 016_M03.ab1: 45669-46574 , 035_C15.ab1: 45669-46574

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014320_010 0.0 - - PREDICTED: uncharacterized protein LOC105629932 [Jatropha curcas]
2 Hb_000340_410 0.1131099424 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
3 Hb_188063_030 0.1378316689 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
4 Hb_003160_070 0.141605597 - - PREDICTED: VIN3-like protein 1 [Jatropha curcas]
5 Hb_000224_080 0.1491745809 - - hypothetical protein RCOM_0510880 [Ricinus communis]
6 Hb_160256_010 0.1541044644 - - -
7 Hb_000920_010 0.1546521789 - - hypothetical protein PRUPE_ppa013940mg [Prunus persica]
8 Hb_001301_330 0.1628980386 - - OTU-like cysteine protease family protein [Populus trichocarpa]
9 Hb_002498_170 0.1635888262 - - PREDICTED: aminomethyltransferase, mitochondrial [Jatropha curcas]
10 Hb_001386_090 0.1644163168 - - PREDICTED: uncharacterized protein LOC105632529 [Jatropha curcas]
11 Hb_000438_130 0.1644358802 - - uroporphyrinogen decarboxylase, putative [Ricinus communis]
12 Hb_004052_070 0.1659751012 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
13 Hb_003397_030 0.1703974182 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic [Jatropha curcas]
14 Hb_004221_030 0.1710068113 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X1 [Jatropha curcas]
15 Hb_006252_030 0.1721083732 - - PREDICTED: uncharacterized protein LOC105638333 [Jatropha curcas]
16 Hb_000169_070 0.1749310941 - - PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Jatropha curcas]
17 Hb_007304_030 0.176395472 - - PREDICTED: uncharacterized protein LOC105635926 isoform X2 [Jatropha curcas]
18 Hb_011004_050 0.1765590234 - - PREDICTED: kinesin-13A [Jatropha curcas]
19 Hb_000206_030 0.1778165848 - - PREDICTED: uncharacterized protein LOC105639682 [Jatropha curcas]
20 Hb_001135_110 0.178226143 - - -

Gene co-expression network

sample Hb_014320_010 Hb_014320_010 Hb_000340_410 Hb_000340_410 Hb_014320_010--Hb_000340_410 Hb_188063_030 Hb_188063_030 Hb_014320_010--Hb_188063_030 Hb_003160_070 Hb_003160_070 Hb_014320_010--Hb_003160_070 Hb_000224_080 Hb_000224_080 Hb_014320_010--Hb_000224_080 Hb_160256_010 Hb_160256_010 Hb_014320_010--Hb_160256_010 Hb_000920_010 Hb_000920_010 Hb_014320_010--Hb_000920_010 Hb_002498_170 Hb_002498_170 Hb_000340_410--Hb_002498_170 Hb_000340_410--Hb_188063_030 Hb_006252_030 Hb_006252_030 Hb_000340_410--Hb_006252_030 Hb_006846_160 Hb_006846_160 Hb_000340_410--Hb_006846_160 Hb_000322_040 Hb_000322_040 Hb_000340_410--Hb_000322_040 Hb_188063_030--Hb_002498_170 Hb_001597_020 Hb_001597_020 Hb_188063_030--Hb_001597_020 Hb_188063_030--Hb_006252_030 Hb_188063_030--Hb_000322_040 Hb_001160_110 Hb_001160_110 Hb_003160_070--Hb_001160_110 Hb_005665_090 Hb_005665_090 Hb_003160_070--Hb_005665_090 Hb_029695_070 Hb_029695_070 Hb_003160_070--Hb_029695_070 Hb_003640_050 Hb_003640_050 Hb_003160_070--Hb_003640_050 Hb_012779_080 Hb_012779_080 Hb_003160_070--Hb_012779_080 Hb_000792_050 Hb_000792_050 Hb_003160_070--Hb_000792_050 Hb_002045_090 Hb_002045_090 Hb_000224_080--Hb_002045_090 Hb_001123_110 Hb_001123_110 Hb_000224_080--Hb_001123_110 Hb_003397_030 Hb_003397_030 Hb_000224_080--Hb_003397_030 Hb_000958_120 Hb_000958_120 Hb_000224_080--Hb_000958_120 Hb_005271_140 Hb_005271_140 Hb_000224_080--Hb_005271_140 Hb_001195_640 Hb_001195_640 Hb_160256_010--Hb_001195_640 Hb_160256_010--Hb_000920_010 Hb_000181_060 Hb_000181_060 Hb_160256_010--Hb_000181_060 Hb_002284_210 Hb_002284_210 Hb_160256_010--Hb_002284_210 Hb_030545_010 Hb_030545_010 Hb_160256_010--Hb_030545_010 Hb_000140_440 Hb_000140_440 Hb_160256_010--Hb_000140_440 Hb_004586_430 Hb_004586_430 Hb_000920_010--Hb_004586_430 Hb_000108_050 Hb_000108_050 Hb_000920_010--Hb_000108_050 Hb_156850_100 Hb_156850_100 Hb_000920_010--Hb_156850_100 Hb_160271_010 Hb_160271_010 Hb_000920_010--Hb_160271_010 Hb_022693_130 Hb_022693_130 Hb_000920_010--Hb_022693_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
41.5489 7.63192 137.805 68.0728 15.005 17.3442
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.7778 10.2652 7.78718 7.52002 57.9653

CAGE analysis