Hb_012636_010

Information

Type -
Description -
Location Contig12636: 409-731
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012636_010 0.0 - - -
2 Hb_008759_020 0.2531457809 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Jatropha curcas]
3 Hb_089032_010 0.2757016168 - - PREDICTED: flotillin-like protein 3 [Jatropha curcas]
4 Hb_010891_020 0.2922383666 - - Cucumisin precursor, putative [Ricinus communis]
5 Hb_090963_010 0.2937612291 - - -
6 Hb_002766_050 0.2978584195 - - PREDICTED: probable carboxylesterase 16 [Jatropha curcas]
7 Hb_000694_060 0.3098857214 - - Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative [Ricinus communis]
8 Hb_000049_240 0.3129175385 - - PREDICTED: uncharacterized protein LOC105644456 [Jatropha curcas]
9 Hb_003274_030 0.3176985838 - - putative wall-associated kinase family protein [Populus trichocarpa]
10 Hb_001300_170 0.3234851775 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000979_110 0.3246469781 - - PREDICTED: GPI mannosyltransferase 2 [Jatropha curcas]
12 Hb_003185_100 0.3248904467 - - hypothetical protein JCGZ_07188 [Jatropha curcas]
13 Hb_003417_030 0.3265687808 - - PREDICTED: sister chromatid cohesion 1 protein 2 isoform X1 [Jatropha curcas]
14 Hb_000671_170 0.3280680378 - - kinase, putative [Ricinus communis]
15 Hb_001391_120 0.3287919646 - - Acetyl esterase, putative [Ricinus communis]
16 Hb_000077_420 0.3300214241 - - hypothetical protein JCGZ_25815 [Jatropha curcas]
17 Hb_000395_210 0.3301487577 - - PREDICTED: nuclear pore complex protein NUP85 [Jatropha curcas]
18 Hb_003120_040 0.3302384006 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Jatropha curcas]
19 Hb_002284_190 0.3306937576 - - PREDICTED: glutamate receptor 3.3 [Jatropha curcas]
20 Hb_001832_050 0.3306952977 - - PREDICTED: cytokinin dehydrogenase 3 [Jatropha curcas]

Gene co-expression network

sample Hb_012636_010 Hb_012636_010 Hb_008759_020 Hb_008759_020 Hb_012636_010--Hb_008759_020 Hb_089032_010 Hb_089032_010 Hb_012636_010--Hb_089032_010 Hb_010891_020 Hb_010891_020 Hb_012636_010--Hb_010891_020 Hb_090963_010 Hb_090963_010 Hb_012636_010--Hb_090963_010 Hb_002766_050 Hb_002766_050 Hb_012636_010--Hb_002766_050 Hb_000694_060 Hb_000694_060 Hb_012636_010--Hb_000694_060 Hb_002284_190 Hb_002284_190 Hb_008759_020--Hb_002284_190 Hb_001776_190 Hb_001776_190 Hb_008759_020--Hb_001776_190 Hb_002660_120 Hb_002660_120 Hb_008759_020--Hb_002660_120 Hb_008759_020--Hb_000694_060 Hb_003687_220 Hb_003687_220 Hb_008759_020--Hb_003687_220 Hb_003120_040 Hb_003120_040 Hb_008759_020--Hb_003120_040 Hb_001113_030 Hb_001113_030 Hb_089032_010--Hb_001113_030 Hb_001936_070 Hb_001936_070 Hb_089032_010--Hb_001936_070 Hb_000111_480 Hb_000111_480 Hb_089032_010--Hb_000111_480 Hb_000671_170 Hb_000671_170 Hb_089032_010--Hb_000671_170 Hb_011716_050 Hb_011716_050 Hb_089032_010--Hb_011716_050 Hb_006846_020 Hb_006846_020 Hb_089032_010--Hb_006846_020 Hb_027654_080 Hb_027654_080 Hb_010891_020--Hb_027654_080 Hb_010891_020--Hb_002766_050 Hb_006120_150 Hb_006120_150 Hb_010891_020--Hb_006120_150 Hb_012340_060 Hb_012340_060 Hb_010891_020--Hb_012340_060 Hb_025787_010 Hb_025787_010 Hb_010891_020--Hb_025787_010 Hb_004208_140 Hb_004208_140 Hb_010891_020--Hb_004208_140 Hb_003835_100 Hb_003835_100 Hb_090963_010--Hb_003835_100 Hb_000448_050 Hb_000448_050 Hb_090963_010--Hb_000448_050 Hb_000072_170 Hb_000072_170 Hb_090963_010--Hb_000072_170 Hb_000000_230 Hb_000000_230 Hb_090963_010--Hb_000000_230 Hb_001230_030 Hb_001230_030 Hb_090963_010--Hb_001230_030 Hb_002928_140 Hb_002928_140 Hb_090963_010--Hb_002928_140 Hb_002766_050--Hb_004208_140 Hb_001616_110 Hb_001616_110 Hb_002766_050--Hb_001616_110 Hb_001054_070 Hb_001054_070 Hb_002766_050--Hb_001054_070 Hb_002766_050--Hb_027654_080 Hb_000123_240 Hb_000123_240 Hb_002766_050--Hb_000123_240 Hb_002374_380 Hb_002374_380 Hb_000694_060--Hb_002374_380 Hb_000868_100 Hb_000868_100 Hb_000694_060--Hb_000868_100 Hb_007017_010 Hb_007017_010 Hb_000694_060--Hb_007017_010 Hb_008948_120 Hb_008948_120 Hb_000694_060--Hb_008948_120 Hb_000948_080 Hb_000948_080 Hb_000694_060--Hb_000948_080 Hb_002236_050 Hb_002236_050 Hb_000694_060--Hb_002236_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 13.0443 12.3062 0 2.5654 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.87626 13.7776 3.22979 14.5833 4.86641

CAGE analysis