Hb_002766_050

Information

Type -
Description -
Location Contig2766: 65281-67767
Sequence    

Annotation

kegg
ID rcu:RCOM_1082400
description catalytic, putative
nr
ID XP_012085596.1
description PREDICTED: probable carboxylesterase 16 [Jatropha curcas]
swissprot
ID Q8LED9
description Probable carboxylesterase 16 OS=Arabidopsis thaliana GN=CXE16 PE=2 SV=1
trembl
ID A0A067K3D1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17898 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28926: 65139-67770 , PASA_asmbl_28927: 65492-65958
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002766_050 0.0 - - PREDICTED: probable carboxylesterase 16 [Jatropha curcas]
2 Hb_004208_140 0.1289085877 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
3 Hb_010891_020 0.1363767215 - - Cucumisin precursor, putative [Ricinus communis]
4 Hb_001616_110 0.1579926482 - - PREDICTED: RPM1-interacting protein 4 [Jatropha curcas]
5 Hb_001054_070 0.1646819971 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
6 Hb_027654_080 0.1814406577 - - PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like isoform X1 [Jatropha curcas]
7 Hb_000123_240 0.1824869475 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
8 Hb_006120_150 0.1844312224 - - invertase [Hevea brasiliensis]
9 Hb_003207_100 0.1853097395 transcription factor TF Family: TCP PREDICTED: transcription factor TCP9-like [Jatropha curcas]
10 Hb_006846_020 0.1881104579 - - PREDICTED: uncharacterized protein LOC105648685 [Jatropha curcas]
11 Hb_121089_020 0.1904794928 - - PREDICTED: UDP-glucose 4-epimerase GEPI48 [Jatropha curcas]
12 Hb_025787_010 0.1907209852 - - PREDICTED: histone H1.2-like [Jatropha curcas]
13 Hb_002343_010 0.1907446891 - - amino acid binding protein, putative [Ricinus communis]
14 Hb_012545_030 0.1921567618 - - Polyadenylate-binding protein RBP47C [Glycine soja]
15 Hb_002482_030 0.192994455 transcription factor TF Family: PLATZ unknown [Medicago truncatula]
16 Hb_001230_030 0.1947751396 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 isoform X2 [Populus euphratica]
17 Hb_004117_270 0.1952057506 - - -
18 Hb_003605_240 0.1961115653 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
19 Hb_003417_030 0.1971512481 - - PREDICTED: sister chromatid cohesion 1 protein 2 isoform X1 [Jatropha curcas]
20 Hb_012799_150 0.198430183 - - PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing protein 13 [Jatropha curcas]

Gene co-expression network

sample Hb_002766_050 Hb_002766_050 Hb_004208_140 Hb_004208_140 Hb_002766_050--Hb_004208_140 Hb_010891_020 Hb_010891_020 Hb_002766_050--Hb_010891_020 Hb_001616_110 Hb_001616_110 Hb_002766_050--Hb_001616_110 Hb_001054_070 Hb_001054_070 Hb_002766_050--Hb_001054_070 Hb_027654_080 Hb_027654_080 Hb_002766_050--Hb_027654_080 Hb_000123_240 Hb_000123_240 Hb_002766_050--Hb_000123_240 Hb_002900_120 Hb_002900_120 Hb_004208_140--Hb_002900_120 Hb_004774_020 Hb_004774_020 Hb_004208_140--Hb_004774_020 Hb_002387_040 Hb_002387_040 Hb_004208_140--Hb_002387_040 Hb_002042_170 Hb_002042_170 Hb_004208_140--Hb_002042_170 Hb_000156_090 Hb_000156_090 Hb_004208_140--Hb_000156_090 Hb_010891_020--Hb_027654_080 Hb_006120_150 Hb_006120_150 Hb_010891_020--Hb_006120_150 Hb_012340_060 Hb_012340_060 Hb_010891_020--Hb_012340_060 Hb_025787_010 Hb_025787_010 Hb_010891_020--Hb_025787_010 Hb_010891_020--Hb_004208_140 Hb_001616_110--Hb_027654_080 Hb_002343_010 Hb_002343_010 Hb_001616_110--Hb_002343_010 Hb_000340_290 Hb_000340_290 Hb_001616_110--Hb_000340_290 Hb_000920_130 Hb_000920_130 Hb_001616_110--Hb_000920_130 Hb_001959_120 Hb_001959_120 Hb_001616_110--Hb_001959_120 Hb_001054_070--Hb_002343_010 Hb_121089_020 Hb_121089_020 Hb_001054_070--Hb_121089_020 Hb_001269_370 Hb_001269_370 Hb_001054_070--Hb_001269_370 Hb_002259_170 Hb_002259_170 Hb_001054_070--Hb_002259_170 Hb_000506_110 Hb_000506_110 Hb_001054_070--Hb_000506_110 Hb_008120_040 Hb_008120_040 Hb_001054_070--Hb_008120_040 Hb_027654_080--Hb_012340_060 Hb_000529_280 Hb_000529_280 Hb_027654_080--Hb_000529_280 Hb_001277_050 Hb_001277_050 Hb_027654_080--Hb_001277_050 Hb_000645_200 Hb_000645_200 Hb_027654_080--Hb_000645_200 Hb_000123_240--Hb_006120_150 Hb_001247_020 Hb_001247_020 Hb_000123_240--Hb_001247_020 Hb_025708_010 Hb_025708_010 Hb_000123_240--Hb_025708_010 Hb_025708_020 Hb_025708_020 Hb_000123_240--Hb_025708_020 Hb_000123_240--Hb_002343_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.576107 18.489 11.3328 3.14186 0.724721 0.470681
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.25715 5.91919 5.55977 6.06456 7.5321

CAGE analysis