Hb_000506_110

Information

Type -
Description -
Location Contig506: 125354-129068
Sequence    

Annotation

kegg
ID pop:POPTR_0014s16200g
description POPTRDRAFT_807663; hypothetical protein
nr
ID XP_012081422.1
description PREDICTED: probable serine/threonine-protein kinase WNK11 [Jatropha curcas]
swissprot
ID Q6ICW6
description Probable serine/threonine-protein kinase WNK11 OS=Arabidopsis thaliana GN=WNK11 PE=2 SV=1
trembl
ID A0A067K191
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18466 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable serine threonine-protein kinase wnk11 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46111: 127414-127614
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000506_110 0.0 - - PREDICTED: probable serine/threonine-protein kinase WNK11 [Jatropha curcas]
2 Hb_003462_180 0.0786610978 transcription factor TF Family: GNAT PREDICTED: probable acetyltransferase NATA1-like [Jatropha curcas]
3 Hb_002259_170 0.0894465502 - - PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial-like [Jatropha curcas]
4 Hb_001511_090 0.0916116492 - - PREDICTED: uncharacterized protein LOC105645861 [Jatropha curcas]
5 Hb_000160_140 0.0998131181 - - PREDICTED: ELL-associated factor 2-like isoform X1 [Jatropha curcas]
6 Hb_008120_040 0.1030841875 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
7 Hb_001269_370 0.1070298119 - - PREDICTED: U-box domain-containing protein 43 [Jatropha curcas]
8 Hb_005656_170 0.1071079328 - - PREDICTED: uncharacterized protein LOC105637447 isoform X1 [Jatropha curcas]
9 Hb_029622_120 0.1085352891 - - PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 [Jatropha curcas]
10 Hb_001160_100 0.1106663884 - - PREDICTED: probable plastid-lipid-associated protein 6, chloroplastic [Jatropha curcas]
11 Hb_000137_010 0.1107386469 - - PREDICTED: uncharacterized protein LOC105644349 [Jatropha curcas]
12 Hb_076778_010 0.1130582899 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
13 Hb_000023_360 0.1134957808 - - phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Jatropha curcas]
14 Hb_001269_620 0.1178021175 - - PREDICTED: magnesium transporter MRS2-1 isoform X1 [Populus euphratica]
15 Hb_000673_010 0.1191762782 - - PREDICTED: uncharacterized protein LOC105636554 isoform X1 [Jatropha curcas]
16 Hb_002203_030 0.1195729699 transcription factor TF Family: NF-YB PREDICTED: protein Dr1 homolog isoform X2 [Jatropha curcas]
17 Hb_000088_260 0.1252792554 - - PREDICTED: uncharacterized protein LOC105636987 [Jatropha curcas]
18 Hb_004225_060 0.1254876006 - - hypothetical protein CISIN_1g027511mg [Citrus sinensis]
19 Hb_005511_140 0.1261966434 - - Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
20 Hb_005235_070 0.1263692806 - - PREDICTED: plastid lipid-associated protein 3, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000506_110 Hb_000506_110 Hb_003462_180 Hb_003462_180 Hb_000506_110--Hb_003462_180 Hb_002259_170 Hb_002259_170 Hb_000506_110--Hb_002259_170 Hb_001511_090 Hb_001511_090 Hb_000506_110--Hb_001511_090 Hb_000160_140 Hb_000160_140 Hb_000506_110--Hb_000160_140 Hb_008120_040 Hb_008120_040 Hb_000506_110--Hb_008120_040 Hb_001269_370 Hb_001269_370 Hb_000506_110--Hb_001269_370 Hb_000023_360 Hb_000023_360 Hb_003462_180--Hb_000023_360 Hb_001629_090 Hb_001629_090 Hb_003462_180--Hb_001629_090 Hb_005656_170 Hb_005656_170 Hb_003462_180--Hb_005656_170 Hb_003462_180--Hb_001511_090 Hb_049575_010 Hb_049575_010 Hb_003462_180--Hb_049575_010 Hb_009288_010 Hb_009288_010 Hb_002259_170--Hb_009288_010 Hb_000452_030 Hb_000452_030 Hb_002259_170--Hb_000452_030 Hb_002259_170--Hb_001269_370 Hb_002259_170--Hb_001511_090 Hb_000137_010 Hb_000137_010 Hb_002259_170--Hb_000137_010 Hb_000340_040 Hb_000340_040 Hb_001511_090--Hb_000340_040 Hb_000088_260 Hb_000088_260 Hb_001511_090--Hb_000088_260 Hb_001008_130 Hb_001008_130 Hb_001511_090--Hb_001008_130 Hb_001511_090--Hb_000023_360 Hb_000169_020 Hb_000169_020 Hb_001511_090--Hb_000169_020 Hb_004225_060 Hb_004225_060 Hb_000160_140--Hb_004225_060 Hb_000723_030 Hb_000723_030 Hb_000160_140--Hb_000723_030 Hb_002203_030 Hb_002203_030 Hb_000160_140--Hb_002203_030 Hb_000230_460 Hb_000230_460 Hb_000160_140--Hb_000230_460 Hb_010287_020 Hb_010287_020 Hb_000160_140--Hb_010287_020 Hb_000160_140--Hb_000137_010 Hb_000673_010 Hb_000673_010 Hb_008120_040--Hb_000673_010 Hb_015807_080 Hb_015807_080 Hb_008120_040--Hb_015807_080 Hb_001766_070 Hb_001766_070 Hb_008120_040--Hb_001766_070 Hb_000260_160 Hb_000260_160 Hb_008120_040--Hb_000260_160 Hb_000979_140 Hb_000979_140 Hb_008120_040--Hb_000979_140 Hb_001269_370--Hb_001511_090 Hb_001269_370--Hb_000452_030 Hb_000920_130 Hb_000920_130 Hb_001269_370--Hb_000920_130 Hb_001307_100 Hb_001307_100 Hb_001269_370--Hb_001307_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.99442 9.22058 11.7611 5.02357 1.33051 2.02361
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.18565 6.58542 3.63796 4.19123 11.1344

CAGE analysis