Hb_000673_010

Information

Type -
Description -
Location Contig673: 25753-35872
Sequence    

Annotation

kegg
ID rcu:RCOM_0520250
description hypothetical protein
nr
ID XP_012075248.1
description PREDICTED: uncharacterized protein LOC105636554 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LC43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11880 PE=4 SV=1
Gene Ontology
ID GO:0048438
description PREDICTED: uncharacterized protein LOC105636554 isoform X1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53490: 34516-34890 , PASA_asmbl_53494: 26001-35993 , PASA_asmbl_53495: 28138-28304 , PASA_asmbl_53496: 31823-32134
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000673_010 0.0 - - PREDICTED: uncharacterized protein LOC105636554 isoform X1 [Jatropha curcas]
2 Hb_001766_070 0.0649987321 - - conserved hypothetical protein [Ricinus communis]
3 Hb_008120_040 0.0863758821 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
4 Hb_005235_070 0.0875634556 - - PREDICTED: plastid lipid-associated protein 3, chloroplastic [Jatropha curcas]
5 Hb_000137_010 0.0925890096 - - PREDICTED: uncharacterized protein LOC105644349 [Jatropha curcas]
6 Hb_000603_190 0.0931559525 - - PREDICTED: serine/arginine repetitive matrix protein 2-like [Jatropha curcas]
7 Hb_001409_060 0.0948564891 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
8 Hb_102948_010 0.0970481814 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
9 Hb_000107_340 0.0988930078 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105637652 [Jatropha curcas]
10 Hb_003925_060 0.1001938222 - - PREDICTED: uncharacterized protein LOC105645218 isoform X1 [Jatropha curcas]
11 Hb_002600_070 0.1012991135 transcription factor TF Family: TAZ PREDICTED: histone acetyltransferase HAC12 [Jatropha curcas]
12 Hb_004774_090 0.1022567084 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
13 Hb_000555_020 0.1042328072 - - APO protein 2, chloroplast precursor, putative [Ricinus communis]
14 Hb_000748_090 0.1050838148 - - glucose inhibited division protein A, putative [Ricinus communis]
15 Hb_000586_020 0.1051221861 desease resistance Gene Name: NB-ARC hypothetical protein F383_02497 [Gossypium arboreum]
16 Hb_000179_190 0.1053521311 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Vitis vinifera]
17 Hb_001277_340 0.105730846 - - aldo/keto reductase, putative [Ricinus communis]
18 Hb_002056_100 0.1061819981 transcription factor TF Family: C2H2 PREDICTED: probable lysine-specific demethylase ELF6 [Jatropha curcas]
19 Hb_000788_030 0.1062754847 - - PREDICTED: dynamin-2A [Jatropha curcas]
20 Hb_002259_170 0.1062771044 - - PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial-like [Jatropha curcas]

Gene co-expression network

sample Hb_000673_010 Hb_000673_010 Hb_001766_070 Hb_001766_070 Hb_000673_010--Hb_001766_070 Hb_008120_040 Hb_008120_040 Hb_000673_010--Hb_008120_040 Hb_005235_070 Hb_005235_070 Hb_000673_010--Hb_005235_070 Hb_000137_010 Hb_000137_010 Hb_000673_010--Hb_000137_010 Hb_000603_190 Hb_000603_190 Hb_000673_010--Hb_000603_190 Hb_001409_060 Hb_001409_060 Hb_000673_010--Hb_001409_060 Hb_000787_080 Hb_000787_080 Hb_001766_070--Hb_000787_080 Hb_001766_070--Hb_000137_010 Hb_000270_600 Hb_000270_600 Hb_001766_070--Hb_000270_600 Hb_001766_070--Hb_001409_060 Hb_001766_070--Hb_008120_040 Hb_015807_080 Hb_015807_080 Hb_008120_040--Hb_015807_080 Hb_000260_160 Hb_000260_160 Hb_008120_040--Hb_000260_160 Hb_000979_140 Hb_000979_140 Hb_008120_040--Hb_000979_140 Hb_000506_110 Hb_000506_110 Hb_008120_040--Hb_000506_110 Hb_000555_020 Hb_000555_020 Hb_005235_070--Hb_000555_020 Hb_003883_010 Hb_003883_010 Hb_005235_070--Hb_003883_010 Hb_102948_010 Hb_102948_010 Hb_005235_070--Hb_102948_010 Hb_000107_340 Hb_000107_340 Hb_005235_070--Hb_000107_340 Hb_002218_020 Hb_002218_020 Hb_005235_070--Hb_002218_020 Hb_002107_050 Hb_002107_050 Hb_005235_070--Hb_002107_050 Hb_000680_120 Hb_000680_120 Hb_000137_010--Hb_000680_120 Hb_000956_040 Hb_000956_040 Hb_000137_010--Hb_000956_040 Hb_000230_460 Hb_000230_460 Hb_000137_010--Hb_000230_460 Hb_000788_030 Hb_000788_030 Hb_000137_010--Hb_000788_030 Hb_005305_100 Hb_005305_100 Hb_000137_010--Hb_005305_100 Hb_004774_090 Hb_004774_090 Hb_000137_010--Hb_004774_090 Hb_000179_190 Hb_000179_190 Hb_000603_190--Hb_000179_190 Hb_008642_060 Hb_008642_060 Hb_000603_190--Hb_008642_060 Hb_003925_060 Hb_003925_060 Hb_000603_190--Hb_003925_060 Hb_000008_280 Hb_000008_280 Hb_000603_190--Hb_000008_280 Hb_002248_130 Hb_002248_130 Hb_000603_190--Hb_002248_130 Hb_001409_060--Hb_102948_010 Hb_001409_060--Hb_002218_020 Hb_000663_080 Hb_000663_080 Hb_001409_060--Hb_000663_080 Hb_001430_020 Hb_001430_020 Hb_001409_060--Hb_001430_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.07165 16.1831 17.4377 8.60276 4.66008 4.37098
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.81215 5.82272 4.84538 4.44796 16.956

CAGE analysis