Hb_001054_070

Information

Type -
Description -
Location Contig1054: 111247-112212
Sequence    

Annotation

kegg
ID pxb:103950550
description mitogen-activated protein kinase kinase 9-like
nr
ID XP_009360049.1
description PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
swissprot
ID Q9FX43
description Mitogen-activated protein kinase kinase 9 OS=Arabidopsis thaliana GN=MKK9 PE=1 SV=1
trembl
ID A0A067KLM3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14745 PE=4 SV=1
Gene Ontology
ID GO:0004672
description mitogen-activated protein kinase kinase 9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001054_070 0.0 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
2 Hb_002343_010 0.1199316569 - - amino acid binding protein, putative [Ricinus communis]
3 Hb_121089_020 0.1252718663 - - PREDICTED: UDP-glucose 4-epimerase GEPI48 [Jatropha curcas]
4 Hb_001269_370 0.1316958723 - - PREDICTED: U-box domain-containing protein 43 [Jatropha curcas]
5 Hb_002259_170 0.1370163035 - - PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial-like [Jatropha curcas]
6 Hb_000506_110 0.1421277491 - - PREDICTED: probable serine/threonine-protein kinase WNK11 [Jatropha curcas]
7 Hb_008120_040 0.1422608847 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
8 Hb_000015_090 0.1465182985 - - PREDICTED: ACT domain-containing protein ACR9 [Jatropha curcas]
9 Hb_033363_050 0.1496947859 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 isoform X2 [Jatropha curcas]
10 Hb_000483_100 0.1501481805 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 9-like [Jatropha curcas]
11 Hb_000452_030 0.1525786703 - - Protein phosphatase 1 regulatory subunit, putative [Ricinus communis]
12 Hb_004117_270 0.1531956264 - - -
13 Hb_004545_120 0.1535933025 - - PREDICTED: uncharacterized protein LOC105647604 [Jatropha curcas]
14 Hb_000673_010 0.1568846744 - - PREDICTED: uncharacterized protein LOC105636554 isoform X1 [Jatropha curcas]
15 Hb_024714_070 0.1583750108 - - PREDICTED: uncharacterized protein LOC105642502 [Jatropha curcas]
16 Hb_000979_140 0.1588988766 - - kinase family protein [Populus trichocarpa]
17 Hb_000933_110 0.1596298464 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 3 [Jatropha curcas]
18 Hb_015807_080 0.1616466124 - - PREDICTED: helicase protein MOM1-like [Jatropha curcas]
19 Hb_002078_270 0.1620298984 - - PREDICTED: F-box protein At1g67340 [Jatropha curcas]
20 Hb_003462_180 0.1621174374 transcription factor TF Family: GNAT PREDICTED: probable acetyltransferase NATA1-like [Jatropha curcas]

Gene co-expression network

sample Hb_001054_070 Hb_001054_070 Hb_002343_010 Hb_002343_010 Hb_001054_070--Hb_002343_010 Hb_121089_020 Hb_121089_020 Hb_001054_070--Hb_121089_020 Hb_001269_370 Hb_001269_370 Hb_001054_070--Hb_001269_370 Hb_002259_170 Hb_002259_170 Hb_001054_070--Hb_002259_170 Hb_000506_110 Hb_000506_110 Hb_001054_070--Hb_000506_110 Hb_008120_040 Hb_008120_040 Hb_001054_070--Hb_008120_040 Hb_002774_200 Hb_002774_200 Hb_002343_010--Hb_002774_200 Hb_012762_040 Hb_012762_040 Hb_002343_010--Hb_012762_040 Hb_001616_110 Hb_001616_110 Hb_002343_010--Hb_001616_110 Hb_002343_010--Hb_001269_370 Hb_002343_010--Hb_121089_020 Hb_002900_120 Hb_002900_120 Hb_121089_020--Hb_002900_120 Hb_024714_070 Hb_024714_070 Hb_121089_020--Hb_024714_070 Hb_000015_090 Hb_000015_090 Hb_121089_020--Hb_000015_090 Hb_007416_260 Hb_007416_260 Hb_121089_020--Hb_007416_260 Hb_000711_010 Hb_000711_010 Hb_121089_020--Hb_000711_010 Hb_002804_010 Hb_002804_010 Hb_121089_020--Hb_002804_010 Hb_001269_370--Hb_002259_170 Hb_001269_370--Hb_000506_110 Hb_001511_090 Hb_001511_090 Hb_001269_370--Hb_001511_090 Hb_000452_030 Hb_000452_030 Hb_001269_370--Hb_000452_030 Hb_000920_130 Hb_000920_130 Hb_001269_370--Hb_000920_130 Hb_001307_100 Hb_001307_100 Hb_001269_370--Hb_001307_100 Hb_009288_010 Hb_009288_010 Hb_002259_170--Hb_009288_010 Hb_002259_170--Hb_000452_030 Hb_002259_170--Hb_001511_090 Hb_002259_170--Hb_000506_110 Hb_000137_010 Hb_000137_010 Hb_002259_170--Hb_000137_010 Hb_003462_180 Hb_003462_180 Hb_000506_110--Hb_003462_180 Hb_000506_110--Hb_001511_090 Hb_000160_140 Hb_000160_140 Hb_000506_110--Hb_000160_140 Hb_000506_110--Hb_008120_040 Hb_000673_010 Hb_000673_010 Hb_008120_040--Hb_000673_010 Hb_015807_080 Hb_015807_080 Hb_008120_040--Hb_015807_080 Hb_001766_070 Hb_001766_070 Hb_008120_040--Hb_001766_070 Hb_000260_160 Hb_000260_160 Hb_008120_040--Hb_000260_160 Hb_000979_140 Hb_000979_140 Hb_008120_040--Hb_000979_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.194 96.6857 81.2935 40.2874 11.5851 4.70101
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.0121 44.8638 28.3533 28.6103 96.3875

CAGE analysis