Hb_000111_480

Information

Type -
Description -
Location Contig111: 423086-424093
Sequence    

Annotation

kegg
ID rcu:RCOM_0621130
description catalytic, putative
nr
ID XP_012068726.1
description PREDICTED: probable carboxylesterase 17 [Jatropha curcas]
swissprot
ID Q9SX25
description Probable carboxylesterase 6 OS=Arabidopsis thaliana GN=CXE6 PE=2 SV=1
trembl
ID A0A067L7T8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24569 PE=4 SV=1
Gene Ontology
ID GO:0052689
description probable carboxylesterase 15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03430: 422955-424163
cDNA
(Sanger)
(ID:Location)		 010_N04.ab1: 423378-424163 , 036_J09.ab1: 423397-424163 , 048_F19.ab1: 423406-424162 , 053_A14.ab1: 423375-424163

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000111_480 0.0 - - PREDICTED: probable carboxylesterase 17 [Jatropha curcas]
2 Hb_001113_030 0.1596470334 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
3 Hb_000042_250 0.1739021541 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
4 Hb_001936_070 0.1793296811 - - PREDICTED: DNA (cytosine-5)-methyltransferase DRM1-like [Jatropha curcas]
5 Hb_002686_120 0.1813836529 - - short-chain type dehydrogenase, putative [Ricinus communis]
6 Hb_007676_020 0.1877911335 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Jatropha curcas]
7 Hb_011716_050 0.1907018895 - - serine acetyltransferase [Hevea brasiliensis]
8 Hb_124315_030 0.1926151666 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
9 Hb_000672_150 0.196143927 - - Patatin T5 precursor, putative [Ricinus communis]
10 Hb_089032_010 0.2001301289 - - PREDICTED: flotillin-like protein 3 [Jatropha curcas]
11 Hb_001959_120 0.2089723804 - - PREDICTED: uncharacterized protein LOC105638487 [Jatropha curcas]
12 Hb_006573_300 0.2161174965 - - ATP binding protein, putative [Ricinus communis]
13 Hb_000913_080 0.2208943574 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 11 [Jatropha curcas]
14 Hb_008173_030 0.2278251857 - - PREDICTED: glutathione S-transferase T1-like [Jatropha curcas]
15 Hb_000608_020 0.2327171511 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
16 Hb_030944_010 0.235346466 - - PREDICTED: uncharacterized protein LOC105633455 [Jatropha curcas]
17 Hb_003120_040 0.2383394073 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Jatropha curcas]
18 Hb_000084_220 0.23879296 - - PREDICTED: uncharacterized protein LOC105634692 [Jatropha curcas]
19 Hb_001114_070 0.239259712 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g58400 [Jatropha curcas]
20 Hb_000856_050 0.2405490216 - - PREDICTED: HIPL1 protein-like [Jatropha curcas]

Gene co-expression network

sample Hb_000111_480 Hb_000111_480 Hb_001113_030 Hb_001113_030 Hb_000111_480--Hb_001113_030 Hb_000042_250 Hb_000042_250 Hb_000111_480--Hb_000042_250 Hb_001936_070 Hb_001936_070 Hb_000111_480--Hb_001936_070 Hb_002686_120 Hb_002686_120 Hb_000111_480--Hb_002686_120 Hb_007676_020 Hb_007676_020 Hb_000111_480--Hb_007676_020 Hb_011716_050 Hb_011716_050 Hb_000111_480--Hb_011716_050 Hb_124315_030 Hb_124315_030 Hb_001113_030--Hb_124315_030 Hb_000672_150 Hb_000672_150 Hb_001113_030--Hb_000672_150 Hb_008173_030 Hb_008173_030 Hb_001113_030--Hb_008173_030 Hb_001959_120 Hb_001959_120 Hb_001113_030--Hb_001959_120 Hb_089032_010 Hb_089032_010 Hb_001113_030--Hb_089032_010 Hb_006573_300 Hb_006573_300 Hb_000042_250--Hb_006573_300 Hb_000042_250--Hb_001113_030 Hb_000042_250--Hb_007676_020 Hb_001114_070 Hb_001114_070 Hb_000042_250--Hb_001114_070 Hb_000042_250--Hb_124315_030 Hb_001936_070--Hb_089032_010 Hb_004235_060 Hb_004235_060 Hb_001936_070--Hb_004235_060 Hb_001936_070--Hb_011716_050 Hb_001936_070--Hb_001113_030 Hb_001936_070--Hb_000042_250 Hb_002035_110 Hb_002035_110 Hb_002686_120--Hb_002035_110 Hb_002686_120--Hb_006573_300 Hb_004631_210 Hb_004631_210 Hb_002686_120--Hb_004631_210 Hb_006453_010 Hb_006453_010 Hb_002686_120--Hb_006453_010 Hb_000343_180 Hb_000343_180 Hb_002686_120--Hb_000343_180 Hb_007676_020--Hb_001114_070 Hb_008066_070 Hb_008066_070 Hb_007676_020--Hb_008066_070 Hb_020805_170 Hb_020805_170 Hb_007676_020--Hb_020805_170 Hb_000084_220 Hb_000084_220 Hb_007676_020--Hb_000084_220 Hb_007676_020--Hb_006573_300 Hb_031862_040 Hb_031862_040 Hb_007676_020--Hb_031862_040 Hb_000107_440 Hb_000107_440 Hb_011716_050--Hb_000107_440 Hb_029622_020 Hb_029622_020 Hb_011716_050--Hb_029622_020 Hb_006846_020 Hb_006846_020 Hb_011716_050--Hb_006846_020 Hb_000038_040 Hb_000038_040 Hb_011716_050--Hb_000038_040 Hb_006935_010 Hb_006935_010 Hb_011716_050--Hb_006935_010 Hb_011716_050--Hb_001959_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.18019 118.402 38.4819 39.4226 0.0439605 0.260569
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.2245 24.5464 39.7539 73.5124 1.9387

CAGE analysis