Hb_000042_250

Information

Type -
Description -
Location Contig42: 203390-204684
Sequence    

Annotation

kegg
ID rcu:RCOM_0517470
description hypothetical protein
nr
ID XP_012070654.1
description PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00700 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000042_250 0.0 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
2 Hb_000111_480 0.1739021541 - - PREDICTED: probable carboxylesterase 17 [Jatropha curcas]
3 Hb_006573_300 0.1924279239 - - ATP binding protein, putative [Ricinus communis]
4 Hb_001113_030 0.1987245643 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
5 Hb_007676_020 0.1988216623 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Jatropha curcas]
6 Hb_001114_070 0.1995023434 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g58400 [Jatropha curcas]
7 Hb_124315_030 0.2109646373 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
8 Hb_031862_040 0.215017299 - - purine transporter, putative [Ricinus communis]
9 Hb_011716_050 0.2210179459 - - serine acetyltransferase [Hevea brasiliensis]
10 Hb_000608_020 0.2233781987 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
11 Hb_000685_060 0.2235517024 - - ring finger protein, putative [Ricinus communis]
12 Hb_020805_170 0.2303637278 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
13 Hb_089032_010 0.2349041652 - - PREDICTED: flotillin-like protein 3 [Jatropha curcas]
14 Hb_008066_070 0.2349609459 transcription factor TF Family: ERF AP2/ERF super family protein [Hevea brasiliensis]
15 Hb_012098_170 0.2352825175 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_16874 [Jatropha curcas]
16 Hb_006453_010 0.2360836032 - - PREDICTED: glutaredoxin-C9 [Jatropha curcas]
17 Hb_116349_040 0.236511855 transcription factor TF Family: Orphans PREDICTED: two-component response regulator ARR5 [Jatropha curcas]
18 Hb_005736_070 0.2385055424 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 1 [Jatropha curcas]
19 Hb_001959_120 0.2403290199 - - PREDICTED: uncharacterized protein LOC105638487 [Jatropha curcas]
20 Hb_000672_150 0.2416953074 - - Patatin T5 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000042_250 Hb_000042_250 Hb_000111_480 Hb_000111_480 Hb_000042_250--Hb_000111_480 Hb_006573_300 Hb_006573_300 Hb_000042_250--Hb_006573_300 Hb_001113_030 Hb_001113_030 Hb_000042_250--Hb_001113_030 Hb_007676_020 Hb_007676_020 Hb_000042_250--Hb_007676_020 Hb_001114_070 Hb_001114_070 Hb_000042_250--Hb_001114_070 Hb_124315_030 Hb_124315_030 Hb_000042_250--Hb_124315_030 Hb_000111_480--Hb_001113_030 Hb_001936_070 Hb_001936_070 Hb_000111_480--Hb_001936_070 Hb_002686_120 Hb_002686_120 Hb_000111_480--Hb_002686_120 Hb_000111_480--Hb_007676_020 Hb_011716_050 Hb_011716_050 Hb_000111_480--Hb_011716_050 Hb_006573_300--Hb_001114_070 Hb_000853_060 Hb_000853_060 Hb_006573_300--Hb_000853_060 Hb_006453_010 Hb_006453_010 Hb_006573_300--Hb_006453_010 Hb_006573_300--Hb_007676_020 Hb_004195_090 Hb_004195_090 Hb_006573_300--Hb_004195_090 Hb_020805_170 Hb_020805_170 Hb_006573_300--Hb_020805_170 Hb_001113_030--Hb_124315_030 Hb_000672_150 Hb_000672_150 Hb_001113_030--Hb_000672_150 Hb_008173_030 Hb_008173_030 Hb_001113_030--Hb_008173_030 Hb_001959_120 Hb_001959_120 Hb_001113_030--Hb_001959_120 Hb_089032_010 Hb_089032_010 Hb_001113_030--Hb_089032_010 Hb_007676_020--Hb_001114_070 Hb_008066_070 Hb_008066_070 Hb_007676_020--Hb_008066_070 Hb_007676_020--Hb_020805_170 Hb_000084_220 Hb_000084_220 Hb_007676_020--Hb_000084_220 Hb_031862_040 Hb_031862_040 Hb_007676_020--Hb_031862_040 Hb_001114_070--Hb_020805_170 Hb_001114_070--Hb_031862_040 Hb_001114_070--Hb_000853_060 Hb_012098_170 Hb_012098_170 Hb_001114_070--Hb_012098_170 Hb_003120_040 Hb_003120_040 Hb_124315_030--Hb_003120_040 Hb_052764_080 Hb_052764_080 Hb_124315_030--Hb_052764_080 Hb_000608_020 Hb_000608_020 Hb_124315_030--Hb_000608_020 Hb_124315_030--Hb_011716_050 Hb_009545_020 Hb_009545_020 Hb_124315_030--Hb_009545_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.170486 3.59362 0.358372 0.539723 0 0.031566
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.533264 0.32267 1.01995 2.33998 0.133488

CAGE analysis